Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03839 ATGGCTTCTGGAGAAGTTGAGTTCCGATGCTTCGTCGGTGGGCTTGCTTGGGCCACTGACAACGATGCTCTTGAGAAGGCCTTCTCACCGTATGGCCAGATCCTCGAATCGAAGGTTATCAACGACCGCGAAACCGGAAGATCACGAGGGTTTGGATTTGTGACCTTCGCCACGGAGCAAGCGATGAGAGACGCTATCGATGGTATGAACGGCCAGAATCTCGACGGCCGTAGCATCACCGTCAACGAGGCTCAGTCCCGTGGAAGAGGTGGTGGCGGAGGTGGTGGTTATGGAAGCGGCGGTGGTGGAGGTTACGGTGGTGGTGGCGGTGGAGGGGGATATGGACGAGGTGGTGGAGGAGGTGGTTATGGTGGAGGCGGCCGCCGTGAAGGGGGTTATAACCGTAATGGTGGTGGTGGTGGAGGTTATGGTGGCGGCGGCGGCGGATACGGAGGTGGTGGTGGTGGTTATGGAGGTGGTAGTAGGGACCGCGGATATGGGGATGGTGGGTCTCGGTACTCGAGAGGAGGTGGTGCTTCCGATGGTGGAAGCTGGAGGAATTAG 564 0.5887 MASGEVEFRCFVGGLAWATDNDALEKAFSPYGQILESKVINDRETGRSRGFGFVTFATEQAMRDAIDGMNGQNLDGRSITVNEAQSRGRGGGGGGGYGSGGGGGYGGGGGGGGYGRGGGGGGYGGGGRREGGYNRNGGGGGGYGGGGGGYGGGGGGYGGGSRDRGYGDGGSRYSRGGGASDGGSWRN 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03839 187 MobiDBLite consensus disorder prediction 152 187 - -
Viun9g03839 187 FunFam Glycine-rich RNA-binding protein GRP1A 2 113 - -
Viun9g03839 187 PANTHER GEO13361P1-RELATED 7 174 - -
Viun9g03839 187 Gene3D - 2 106 IPR012677 -
Viun9g03839 187 SMART rrm1_1 9 82 IPR000504 GO:0003723
Viun9g03839 187 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Viun9g03839 187 CDD RRM2_NsCP33_like 9 84 - -
Viun9g03839 187 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Viun9g03839 187 SUPERFAMILY RNA-binding domain, RBD 8 118 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03839 Viun-Chr9 42957413 42958618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03839 10 94 Eukaryotic Initiation Factors Gene Family AT1G71770 38.636 6.70e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03839 - K13195 gmx:100777821 159.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03839 9 42957413 42958618 Viun9g03839 9 42957413 42958618 ECH