Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03834 ATGGAGATACGAAAGTATCTTATAAAGAGGTTTCACACAAATCGAAATGTACAATTTGAATTGAAAGATTTGTTAGAGATCAATCTTGGAGATGTGGATGCTAGGCAAGAGGTAATGGTGTTTCTGGATTACTGGGGTTTGATTAATTTCGATTCTTTATCTTCTATGGGTTATGTTGATTCAGTGAAACAGGAGGAACCAACAGTTGAGTACCATTGCAAATCTTGTTCTGTTGACTGTTCTCTCAAGGGCTACCATTGCCAGAAGCAGATCCCTTCATTGCTTCAAGGATTTGTATTCATTAACTATCTTTTGTTTTATGGCTGTTTGTCATTGTTTGTGTTGATTGATTTTGCTGTCTGTCATTTAGATAGCAACAAGCTGTTGTATGATGTGTCTGACGGGGCAGATTTTTATATATGTACCAATTGCTTCAGTAATGGAAAATTTGGCTCTGGCATGTCCTCCTTGGATTTTTTACTCATGGAGCCGTCAGAAGTACCAGGGATTAGTGGTGGAAAATGGACTGATCAGGAGACTCTTTTGCTCCATGAAGCATTAGAACTTTATAAAGAAAACTGGAATGAAATTTCAGAACACGTTGCAGCAAAATCAAAAAGCTCAATTACACTTTTTCAAATGCCAATTGAAGATGCCTATGTTGATTGTGGTGATGATGCTGATGCAAATGCTTTAGAATTTTATGAGAATAAGATTAGTGATGCCATTGAAGTCCATGCGCGGTCCCTTCAAATTGAAACTACTAAAGCTGACGATGGTAATAATGTGAAAGTTAATGAGGAGACTCCAAAACCAGACAATGTTGATGACGAGAAAACCTGTGAGCAAACCTCTAAATCAGAAGATGATTTAAAATTAAAATTTGGTCAAGAAGAAGGCGACAACTATTCTCAAAATGCACTGGAGGAAACATTTATATATCTTCCCTACTCCATGGATGCATCTCAAGACAGTCCTGTAATTACTGAAGTTTTTAATGTTCGAAGGCACCCAATAGCATTTTTCCTTGGACGCATGGTGGATTCTGGTGCAGCTGTTGCTTCAGGGCATAACTCTTCAAAATCCATGTCTGTAAATTCTCCCAGCACTGTGCTTTCTGCAAGGCACTGTTTTCTTCTGGAAGATCCACCCGGTGATAATAAGCCAAGTAGATCTAAGAGACGATGGAGTCTGGAAAAATCAATTGTTTTAAAGGAGAAAGCAATGATTGATAATGAGGAAGTTGCTTATGATAATTGTAATTTAAAGTTACCCAGTGATCAAGCAACAAGGGCTGTACATGGTTCTGATGGTTCTACACTCAAGGATAAAGTTCTACTCAGTTCTGAGTTGAAAAAGGGAATTTCACCGCATAAGAGCTCCCAGCCAATTCAAGAACTAAAGAATGGAGGCGTGTCCAACGATCTTCCAGCAGAAAATAGACTTCCACAGTATATTAAATCCAATCTAGGAGAAACAAAAAATGTTAATGCAGTGTCTGATTTATGCCCTCAGATAAGAGCAAGCCTTTAA 1533 0.381 MEIRKYLIKRFHTNRNVQFELKDLLEINLGDVDARQEVMVFLDYWGLINFDSLSSMGYVDSVKQEEPTVEYHCKSCSVDCSLKGYHCQKQIPSLLQGFVFINYLLFYGCLSLFVLIDFAVCHLDSNKLLYDVSDGADFYICTNCFSNGKFGSGMSSLDFLLMEPSEVPGISGGKWTDQETLLLHEALELYKENWNEISEHVAAKSKSSITLFQMPIEDAYVDCGDDADANALEFYENKISDAIEVHARSLQIETTKADDGNNVKVNEETPKPDNVDDEKTCEQTSKSEDDLKLKFGQEEGDNYSQNALEETFIYLPYSMDASQDSPVITEVFNVRRHPIAFFLGRMVDSGAAVASGHNSSKSMSVNSPSTVLSARHCFLLEDPPGDNKPSRSKRRWSLEKSIVLKEKAMIDNEEVAYDNCNLKLPSDQATRAVHGSDGSTLKDKVLLSSELKKGISPHKSSQPIQELKNGGVSNDLPAENRLPQYIKSNLGETKNVNAVSDLCPQIRASL 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03834 510 MobiDBLite consensus disorder prediction 455 469 - -
Viun9g03834 510 CDD SANT 174 209 IPR001005 -
Viun9g03834 510 MobiDBLite consensus disorder prediction 455 478 - -
Viun9g03834 510 ProSiteProfiles SANT domain profile. 170 219 IPR017884 -
Viun9g03834 510 MobiDBLite consensus disorder prediction 260 288 - -
Viun9g03834 510 SUPERFAMILY Homeodomain-like 1 51 IPR009057 -
Viun9g03834 510 MobiDBLite consensus disorder prediction 258 288 - -
Viun9g03834 510 Gene3D - 1 53 IPR036388 -
Viun9g03834 510 ProSiteProfiles SWIRM domain profile. 1 59 IPR007526 GO:0005515
Viun9g03834 510 SUPERFAMILY Homeodomain-like 168 210 IPR009057 -
Viun9g03834 510 Gene3D - 171 219 - -
Viun9g03834 510 PANTHER SWI/SNF COMPLEX-RELATED 171 413 - -
Viun9g03834 510 Pfam Myb-like DNA-binding domain 173 209 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03834 Viun-Chr9 42901634 42905741 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun9g03834 Myb_DNA-binding 3.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03834 K11649 - gmx:100799723 317.005