Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03798 ATGCTGGCAATGGAAGAGGTACTGTGTGAACTTAGTGATCATGAAAAGAGAAACGAGCAAGGTCTGCCACCGGGTTTCAGGTTTCACCCCACTGATGAAGAACTCATAACCTTTTACCTCGCTTCAAAAGTCTTCAATGGCACCTTCACCACCGTCAAGTTTGCTGAGGTTGATCTCAATAGATGTGAGCCTTGGGAACTTCCAGATGTGGCGAAGATGGGGGAGAGAGAGTGGTATCTGTTCAGCTTGAGGGACAGAAAATACCCGACCGGACTTAGAACAAACAGGGCGACCGGAGCTGGGTACTGGAAAGCCACTGGGAAGGACAAGGAAGTGTTCAGTGCATCAAGTGGAACCCTACTTGGGATGAAGAAGACCCTTGTTTTCTACAAAGGAAGGGCCCCTCGTGGGGAAAAGACCAAATGGGTCATGCATGAGTACCGTTTGGACGGTGACTTTTCCCTTCCCCACCCTCACCCTCATCACATCTCAAAGGAAGAGTGGGTGATATGCAGGATATTTCATAAATCCGTGGAAAAGAGGACTCCACTGCTCCAGGTTCAAGGGCATTCAGATGCTTCTTCTTCACCAGCAAAAAATTCTTTACCTCCTTTACCTCCATTGGAACTAGAACAACTAGAACACCAAACTCACCTCTCTCATTCTCACCCTTATCTTTTCCCATTGCATGCATCACCGCAACTCACTAACACCAGAAACCATACATCATTTTCTGACCTATTCTTCAAGCCCCCCCCGCACCTCTCACAACAACAAAACTGCATCCTCAAGGAAAAAACAGCTCCGAAAGTAATAAAAACGGAGGAGGCTACAGCATTGTATCAGTACCATTTACTAGGTGACAGTAACAACAACCTGCGGTTGAACCAAAATCCAAGTAATTTCCCAAACCCTTTCGGTGATGTTGAGGTGGATGGTGGTGGGTTGTTGATGGCATTCTCAGGAGGTCCAAATGGTGAAGTTAGGGACATGTCCACTTCGACAGCCTTTAATAGGGTGGTAGGGTTGCAGCAGCTCATAGATGCTGCTCATATCGGAATAGATTCTTGGCCTCTGGCCCAGCATGTTTAA 1092 0.4716 MLAMEEVLCELSDHEKRNEQGLPPGFRFHPTDEELITFYLASKVFNGTFTTVKFAEVDLNRCEPWELPDVAKMGEREWYLFSLRDRKYPTGLRTNRATGAGYWKATGKDKEVFSASSGTLLGMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSLPHPHPHHISKEEWVICRIFHKSVEKRTPLLQVQGHSDASSSPAKNSLPPLPPLELEQLEHQTHLSHSHPYLFPLHASPQLTNTRNHTSFSDLFFKPPPHLSQQQNCILKEKTAPKVIKTEEATALYQYHLLGDSNNNLRLNQNPSNFPNPFGDVEVDGGGLLMAFSGGPNGEVRDMSTSTAFNRVVGLQQLIDAAHIGIDSWPLAQHV 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03798 363 FunFam NAC domain-containing protein 100-like 31 180 - -
Viun9g03798 363 Pfam No apical meristem (NAM) protein 23 149 IPR003441 GO:0003677|GO:0006355
Viun9g03798 363 SUPERFAMILY NAC domain 17 176 IPR036093 GO:0003677|GO:0006355
Viun9g03798 363 Gene3D NAC domain 31 180 IPR036093 GO:0003677|GO:0006355
Viun9g03798 363 MobiDBLite consensus disorder prediction 187 206 - -
Viun9g03798 363 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 19 240 - -
Viun9g03798 363 ProSiteProfiles NAC domain profile. 22 176 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03798 Viun-Chr9 42750395 42752551 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03798 1 182 NAC Transcription Factor Family AT1G76420 73.626 5.14e-95 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun9g03798 NAM 1.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03798 - - gmx:100780313 482.641