Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03778 ATGTATGATTTGGGAGTGGTTATGCCTGTGGGAATGAATTTGCCTCCTCCTTTTACTGTGATAGAGGACAAAGACAGTGCATTTCCGATGGAAGATGATAAATCAGGTGATTTGGATAATCTAAAACCAATGACCAAGGGTAAGCCTCCGCGGCATGTTTCGAGTTTGAGGCACAGCGTTAGCACCACCAGATTGATGGCAGTAGCAGATTTGAGTTTGGATGTGGGGGTTACTGGAAGCAAGTCATCTTCTGAAGAAAAGACGGAGTTTCTACCAATATTTCGGTCAGGAAGTTGTGCTGAAAGAGGACCTAAACAGTATATGGAAGACGAACACGTATGCATTGATGATCTTATTCAGCATATGGGTCCTGCCTCAACTATTCCTTTACCTGGAGCTTTTTATGGGGTGTTTGATGGCCATGGTGGTACAGACGCAGCTTTGTTCATAAGAAATAACATCCTCAAATTCATAGTTGAAGACTCCCATTTTCCAACCTGCGTGGGGCAGGCAATTACAAGTGCGTTTCTGAAAGCAGATTATGCATTTGCAGATTCTAGTTCTCTCGATATCTCCTCTGGGACCACTGCTTTAACTGCTCTTGTATCCGGAAGGAACATGATAGTTGCGAATGCCGGGGACTGCAGAGCTGTACTGGGGAGGCGAGGTAGAGCAATTGAGATGTCAAAAGACCAGAAACCAGATTGCATTTCGGAAAGGCTAAGGATTGAGAAACTTGGTGGAGTGGTGTACGATGGATACCTGAATGGGCAGTTATCTGTTTCCCGTGCCTTGGGAGACTGGCACATGAAGGGTCCGAAGGGTTCTGCGTGTCCCTTGAGTTCTGAGCCAGAGCTGCAGGAAATCATCCTCACTGAGGATGACGAGTTCTTGATCATGGGCTGTGACGGCCTGTGGGATGTAATGAGTAACCAATTTGCTGTGACAATGGCAAGGAAAGAACTAATGATACATAATGATCCTCAAAGGTGTTCAAGAGAACTGGTTAGAGAGGCTCTCAAGCGTAACTCCTGTGATAATTTGACTGTTATAGTCATATGTTTCTCCCCAGATCCTCCTCCTAGGATAGAGACACCTCCTTCTCGGGTAAGGAGGAGTATATCAGCAGAAGGTCTCAATTTACTTAAGGGTGTGTTGGATTCTTAG 1167 0.4542 MYDLGVVMPVGMNLPPPFTVIEDKDSAFPMEDDKSGDLDNLKPMTKGKPPRHVSSLRHSVSTTRLMAVADLSLDVGVTGSKSSSEEKTEFLPIFRSGSCAERGPKQYMEDEHVCIDDLIQHMGPASTIPLPGAFYGVFDGHGGTDAALFIRNNILKFIVEDSHFPTCVGQAITSAFLKADYAFADSSSLDISSGTTALTALVSGRNMIVANAGDCRAVLGRRGRAIEMSKDQKPDCISERLRIEKLGGVVYDGYLNGQLSVSRALGDWHMKGPKGSACPLSSEPELQEIILTEDDEFLIMGCDGLWDVMSNQFAVTMARKELMIHNDPQRCSRELVREALKRNSCDNLTVIVICFSPDPPPRIETPPSRVRRSISAEGLNLLKGVLDS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03778 388 MobiDBLite consensus disorder prediction 31 46 - -
Viun9g03778 388 SUPERFAMILY PP2C-like 89 356 IPR036457 -
Viun9g03778 388 CDD PP2Cc 94 355 IPR001932 -
Viun9g03778 388 ProSitePatterns PPM-type phosphatase domain signature. 134 142 IPR000222 GO:0043169
Viun9g03778 388 Gene3D - 73 358 IPR036457 -
Viun9g03778 388 SMART PP2C_4 85 353 IPR001932 -
Viun9g03778 388 SMART PP2C_SIG_2 110 355 IPR001932 -
Viun9g03778 388 FunFam Probable protein phosphatase 2C 22 80 358 - -
Viun9g03778 388 Pfam Protein phosphatase 2C 96 347 IPR001932 -
Viun9g03778 388 MobiDBLite consensus disorder prediction 31 54 - -
Viun9g03778 388 PANTHER PROTEIN PHOSPHATASE 2C 83 353 IPR015655 GO:0004722|GO:0006470
Viun9g03778 388 ProSiteProfiles PPM-type phosphatase domain profile. 95 355 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03778 Viun-Chr9 42671286 42674708 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03778 10 387 PP2C-type Phosphatase Gene Family AT2G33700 71.018 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03778 K14803 - gmx:100778015 709.523