Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03765 ATGGAGGCAGAACATCACCAAGATACCTCAACCGCAATCGAAAGCCTTTACGTTAAAGTGATGACCGACGAACAAATGGAACTGCTCCGGCAACAGATATCCGTCTACGCCACCATCTGCGAACAGCTTGTAGAGATGCACAAAGCAGTAACCACCCAGCAAGACCTCGCAGGGCTGAGGCTGGGTAATTTGTACTGTGATCCGTTGATGGCGTGTTCTGGACACAAGATAACGGCGAGGCAGCGTTGGACTCCGACGCCTCTGCAGCTTCAAATTCTGGAGCGAATTTTCGATGAGGGAAATGGCACTCCGAGTAAGCAGAAGATCAAGGAGATAACCACCGAACTGGGGCAACACGGCCAAATATCAGAGACGAATGTGTATAACTGGTTCCAGAACAGAAGGGCTCGTTCGAAGAGGAAGCAACTCGCTCCCGCCGCGCCGGAGCCAGAAGCCGAGGCGGAAGTTGAGTCTCCGAGAGAGAAAAAGATACGCGCCGCCGAGAGCGTTCAGGTTGTTCAACCCTTTGAGAATTCATCACCTCATAGGATGAAGGACATGTACATCCACAGTCCTGACTTAGGATTTGACCAATTGCTGAGTAAAATAGAAGTTGCAGGCTGTTACAGCTCTTATTTTCTTTGA 645 0.5023 MEAEHHQDTSTAIESLYVKVMTDEQMELLRQQISVYATICEQLVEMHKAVTTQQDLAGLRLGNLYCDPLMACSGHKITARQRWTPTPLQLQILERIFDEGNGTPSKQKIKEITTELGQHGQISETNVYNWFQNRRARSKRKQLAPAAPEPEAEAEVESPREKKIRAAESVQVVQPFENSSPHRMKDMYIHSPDLGFDQLLSKIEVAGCYSSYFL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03765 214 CDD homeodomain 80 142 IPR001356 GO:0003677
Viun9g03765 214 SUPERFAMILY Homeodomain-like 79 142 IPR009057 -
Viun9g03765 214 Gene3D - 81 144 - -
Viun9g03765 214 PANTHER WUSCHEL-RELATED HOMEOBOX 13 8 197 IPR044559 GO:0003700
Viun9g03765 214 MobiDBLite consensus disorder prediction 139 162 - -
Viun9g03765 214 Pfam Homeodomain 80 140 IPR001356 GO:0003677
Viun9g03765 214 SMART HOX_1 78 145 IPR001356 GO:0003677
Viun9g03765 214 ProSiteProfiles 'Homeobox' domain profile. 76 141 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03765 Viun-Chr9 42635523 42636878 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03765 16 212 Wox Gene Family AT4G35550 53.744 2.63e-74 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Viun9g03765 Homeodomain 1.1e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03765 - - var:108342525 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03765 9 42635523 42636878 Viun9g03765 9 42635523 42636878 ECH