Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03722 ATGGGAGACACAGCGAGTTGCAGTAGCGGAATTTTGAACTCTGGATGGAATCATCGATGTCCAAAACAGAGACAGAAGGTCGGAGTTTACAACGAGGTTTTGTGCAGACTTAAGGAATTGAATGTCCCAGAAGCTGTGGTTCCTGGTTTTGAGGACGATCTTTGGTCGCACTTCTATCGCCTTCCCGCAAGGTATGCGTTGGACATGAATGTGGAGAGGGCAGAAGAAGTTCTGATGCATAAGAGGTTACTGGACATCGCAGGAGGCCCAATTACAGCAATCGGACCTGCAATTGAAGTCCGTCTTGTACAGGTTCGTTCTGCTTCTGCTGGAGGTTCTAGTAAATCCCTTCTTTCAAATTCACAAAGTAAAGTTTGTCCCGAAGATTCTGATGTTCCAGGCAGCATGAGCTTCCATCCTCCACCTGCATTCGGTTCGTCATCTAATATGGAACATAACACCCAGTTCTTACCAGTTCGAGACAGGGATAACTATTTGAATTTTTATACACATTATGCTCGGCCAATGCATGAAATCACAATTTCAACAAATGACAAACCAAAACTTCTGAGCCAGTTGACTTCCTTACTTTCTGAGACTGGGTTGGACATTCTGGAAGCTCATGCTTTTTCGACAATAGACGGCTATTCATTGGATGTTTTTGTTGTTGGTGGTTGGCCAATAGAGGAGACGAAGAAGTTAAAACATGAACTAGCAAAGAAAATTCAGAAACTCCAGCAACATCAATTGAAAGAAAATGGGAGTGTTCCTACTACTAGTACTACTGCAAAGCAAGAGCAAACAGGGATGAACTTTATCTGGAGAATCGATGCCGGGTGTCTGAGATTTGAAAAGAAAATTGCATCTGGACCTCTGAGTGATTTGTATAAAGGTACATTCTACAATCAAGATGTAGCTATCAAGGTTCTAAAGCACGAGAATTTGAATGAAAATATACAAAGGGAATTTGCTCAGGAAGTGTATATCATAAGTCAAATTAAGCACAAAAATGTTGTTAAATTTGTTGGCGCTTGTACACAATCCCCAAACCTGTACCTGGTCACAGAATACATGCCTGGTGGAAGTATGTTCGACTTTTTGCATAAACAGAAAACCGCCCTTGCTCTTCCAACTTTACTCAAAGTAGCCATTGATGTTTGTGAAGGAATGAAATATTTGCATCAGAATAATATCATACATCGGGACCTTAAAGCTGCTAATCTTTTGATCGATGAGAATGGGGTAGTTAAGGTTGCTGATTTTGGTGTGGCTAGAGTGCACAATCAATCTGGCATAATGACTGCAGAAACAGGAACTTATAGGTGGATGGCTCCAGAGGCATGGATGTGGCTGTTTAAGGACACGATAGGCAGCAGTTTTTGA 1383 0.4172 MGDTASCSSGILNSGWNHRCPKQRQKVGVYNEVLCRLKELNVPEAVVPGFEDDLWSHFYRLPARYALDMNVERAEEVLMHKRLLDIAGGPITAIGPAIEVRLVQVRSASAGGSSKSLLSNSQSKVCPEDSDVPGSMSFHPPPAFGSSSNMEHNTQFLPVRDRDNYLNFYTHYARPMHEITISTNDKPKLLSQLTSLLSETGLDILEAHAFSTIDGYSLDVFVVGGWPIEETKKLKHELAKKIQKLQQHQLKENGSVPTTSTTAKQEQTGMNFIWRIDAGCLRFEKKIASGPLSDLYKGTFYNQDVAIKVLKHENLNENIQREFAQEVYIISQIKHKNVVKFVGACTQSPNLYLVTEYMPGGSMFDFLHKQKTALALPTLLKVAIDVCEGMKYLHQNNIIHRDLKAANLLIDENGVVKVADFGVARVHNQSGIMTAETGTYRWMAPEAWMWLFKDTIGSSF 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03722 460 SUPERFAMILY Protein kinase-like (PK-like) 260 451 IPR011009 -
Viun9g03722 460 MobiDBLite consensus disorder prediction 112 132 - -
Viun9g03722 460 ProSiteProfiles Protein kinase domain profile. 281 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g03722 460 Gene3D Transferase(Phosphotransferase) domain 1 359 455 - -
Viun9g03722 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 398 410 IPR008271 GO:0004672|GO:0006468
Viun9g03722 460 MobiDBLite consensus disorder prediction 112 128 - -
Viun9g03722 460 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 113 447 - -
Viun9g03722 460 SMART serkin_6 281 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g03722 460 Pfam Protein tyrosine and serine/threonine kinase 281 448 IPR001245 GO:0004672|GO:0006468
Viun9g03722 460 ProSiteProfiles ACT domain profile. 178 257 IPR002912 -
Viun9g03722 460 Gene3D Phosphorylase Kinase; domain 1 275 358 - -
Viun9g03722 460 PRINTS Tyrosine kinase catalytic domain signature 438 448 IPR001245 GO:0004672|GO:0006468
Viun9g03722 460 PRINTS Tyrosine kinase catalytic domain signature 392 410 IPR001245 GO:0004672|GO:0006468
Viun9g03722 460 PRINTS Tyrosine kinase catalytic domain signature 355 368 IPR001245 GO:0004672|GO:0006468
Viun9g03722 460 Coils Coil 228 251 - -
Viun9g03722 460 CDD STKc_MAP3K-like 287 448 - -
Viun9g03722 460 SUPERFAMILY ACT-like 176 246 IPR045865 -
Viun9g03722 460 FunFam Kinase suppressor of Ras 1 270 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03722 Viun-Chr9 42336284 42340913 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03722 1 446 MAP Kinase Kinase Kinase AT4G38470 55.819 2.14e-166 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Viun9g03722 PK_Tyr_Ser-Thr 7.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03722 - - vra:106761427 816.609