Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03721 ATGGGAGACACAGCGAGTTGCAGTAGCGGAATTTTGAACTCTGGATGGAATCATCGATGTCCAAAACAGAGACAGAAGGTCGGAGTTTACAACGAGGTTTTGTGCAGACTTAAGGAATTGAATGTCCCAGAAGCTGTGGTTCCTGGTTTTGAGGACGATCTTTGGTCGCACTTCTATCGCCTTCCCGCAAGGTATGCGTTGGACATGAATGTGGAGAGGGCAGAAGAAGTTCTGATGCATAAGAGGTTACTGGACATCGCAGGAGGCCCAATTACAGCAATCGGACCTGCAATTGAAGTCCGTCTTGTACAGGTTCGTTCTGCTTCTGCTGGAGGTTCTAGTAAATCCCTTCTTTCAAATTCACAAAGTAAAGTTTGTCCCGAAGATTCTGATGTTCCAGGCAGCATGAGCTTCCATCCTCCACCTGCATTCGGTTCGTCATCTAATATGGAACATAACACCCAGTTCTTACCAGTTCGAGACAGGGATAACTATTTGAATTTTTATACACATTATGCTCGGCCAATGCATGAAATCACAATTTCAACAAATGACAAACCAAAACTTCTGAGCCAGTTGACTTCCTTACTTTCTGAGACTGGGTTGGACATTCTGGAAGCTCATGCTTTTTCGACAATAGACGGCTATTCATTGGATGTTTTTGTTGTTGGTGGTTGGCCAATAGAGGAGACGAAGAAGTTAAAACATGAACTAGCAAAGAAAATTCAGAAACTCCAGCAACATCAATTGAAAGAAAATGGGAGTGTTCCTACTACTAGTACTACTGCAAAGCAAGAGCAAACAGGGATGAACTTTATCTGGAGAATCGATGCCGGGTGTCTGAGATTTGAAAAGAAAATTGCATCTGGACCTCTGAGTGATTTGTATAAAGGTACATTCTACAATCAAGATGTAGCTATCAAGGTTCTAAAGCACGAGAATTTGAATGAAAATATACAAAGGGAATTTGCTCAGGAAGTGTATATCATAAGTCAAATTAAGCACAAAAATGTTGTTAAATTTGTTGGCGCTTGTACACAATCCCCAAACCTGTACCTGGTCACAGAATACATGCCTGGTGGAAGTATGTTCGACTTTTTGCATAAACAGAAAACCGCCCTTGCTCTTCCAACTTTACTCAAAGTAGCCATTGATGTTTGTGAAGGAATGAAATATTTGCATCAGAATAATATCATACATCGGGACCTTAAAGCTGCTAATCTTTTGATCGATGAGAATGGGGTAGTTAAGGTTGCTGATTTTGGTGTGGCTAGAGTGCACAATCAATCTGGCATAATGACTGCAGAAACAGGAACTTATAGGTGGATGGCTCCAGAGGTTATTGAACATAGACCATATGATCACAAAGCCGATGTGTTTAGCTTTGCCATTGTTCTTTGGGAACTGCTCACAGGAAAGCTTCCATATGAGCATTTGTCTCCATTGCAAGCAGCAGTAGGAGTGATCCAGAAGGGTTTAAGGCCAAAAATTCCAAGCAATACTCATTCACAGTTAGTGGAATTGCTTCACTGGTGCTGGCACCATGATTCATCTCTGAGACCCAATTTCTCAGAAATTCTGGAATTTCTGCTACGTGTGACCAAAACGGTTACTGGGGAATGTGAAGGCTAA 1632 0.4179 MGDTASCSSGILNSGWNHRCPKQRQKVGVYNEVLCRLKELNVPEAVVPGFEDDLWSHFYRLPARYALDMNVERAEEVLMHKRLLDIAGGPITAIGPAIEVRLVQVRSASAGGSSKSLLSNSQSKVCPEDSDVPGSMSFHPPPAFGSSSNMEHNTQFLPVRDRDNYLNFYTHYARPMHEITISTNDKPKLLSQLTSLLSETGLDILEAHAFSTIDGYSLDVFVVGGWPIEETKKLKHELAKKIQKLQQHQLKENGSVPTTSTTAKQEQTGMNFIWRIDAGCLRFEKKIASGPLSDLYKGTFYNQDVAIKVLKHENLNENIQREFAQEVYIISQIKHKNVVKFVGACTQSPNLYLVTEYMPGGSMFDFLHKQKTALALPTLLKVAIDVCEGMKYLHQNNIIHRDLKAANLLIDENGVVKVADFGVARVHNQSGIMTAETGTYRWMAPEVIEHRPYDHKADVFSFAIVLWELLTGKLPYEHLSPLQAAVGVIQKGLRPKIPSNTHSQLVELLHWCWHHDSSLRPNFSEILEFLLRVTKTVTGECEG 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03721 543 MobiDBLite consensus disorder prediction 112 132 - -
Viun9g03721 543 Pfam Protein tyrosine and serine/threonine kinase 281 530 IPR001245 GO:0004672|GO:0006468
Viun9g03721 543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 398 410 IPR008271 GO:0004672|GO:0006468
Viun9g03721 543 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 114 530 - -
Viun9g03721 543 PRINTS Tyrosine kinase catalytic domain signature 457 479 IPR001245 GO:0004672|GO:0006468
Viun9g03721 543 PRINTS Tyrosine kinase catalytic domain signature 392 410 IPR001245 GO:0004672|GO:0006468
Viun9g03721 543 PRINTS Tyrosine kinase catalytic domain signature 501 523 IPR001245 GO:0004672|GO:0006468
Viun9g03721 543 PRINTS Tyrosine kinase catalytic domain signature 438 448 IPR001245 GO:0004672|GO:0006468
Viun9g03721 543 PRINTS Tyrosine kinase catalytic domain signature 355 368 IPR001245 GO:0004672|GO:0006468
Viun9g03721 543 ProSiteProfiles Protein kinase domain profile. 281 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g03721 543 MobiDBLite consensus disorder prediction 112 128 - -
Viun9g03721 543 CDD STKc_MAP3K-like 287 530 - -
Viun9g03721 543 Gene3D Transferase(Phosphotransferase) domain 1 359 541 - -
Viun9g03721 543 ProSiteProfiles ACT domain profile. 178 257 IPR002912 -
Viun9g03721 543 SMART serkin_6 281 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g03721 543 Gene3D Phosphorylase Kinase; domain 1 275 358 - -
Viun9g03721 543 SUPERFAMILY Protein kinase-like (PK-like) 262 530 IPR011009 -
Viun9g03721 543 Coils Coil 228 251 - -
Viun9g03721 543 SUPERFAMILY ACT-like 176 246 IPR045865 -
Viun9g03721 543 FunFam Kinase suppressor of Ras 1 270 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03721 Viun-Chr9 42335115 42340913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03721 3 537 MAP Kinase Kinase Kinase AT2G17700 55.636 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Viun9g03721 PK_Tyr_Ser-Thr 6.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03721 - - vra:106761427 1001.5