Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03716 ATGTCTCAAAAATACAGCACCGTGGTCTACCTCCATGGGACCCTCGATCTGGTAATCGTCGAGGCTCGCTGCCTTCCCAACATGGATTTGCTCTCTGAGCGTGTCCGAAGGTTCTTCTCCGCCCTCAACACTTGCAGCACCTCCATCTCAGCAAAACGGAAGCTCCACCGTGCGCGCCACCACCACCACAAGATCATCACCAGCGATCCTTACGTCACCGTGTGCCTTGCTGGAGCCACCGTCGCGCGCACCCGCGTCATCTCGAATTCGCAGAGCCCTGCCTGGGACGAGCACTTCAAGATTCCACTCGCGCACCCGGCCGCACAGGTCGACTTCTTCGTGAAGGACAACGACATGTTCGGCGCCGACCTCATCGGAATCGTCACCATCTCCGCCGAGAGGATCCTCGCAGGTGGACCAATCAGCGACTGGTTTCCGATCATCGGCTCGTTCGGAAAGCCGCCTAAGCCTGACTGTGCGCTGTGCCTAGCGATGAAATTCACGAAGTGCGAGGACATTCGCTTGTTCCGGTCTCTCAAAGAACCGGATCCGGATCGGTTCGTGGTTCGGGACTCGTATTTCCCGGTCCGGCATGGAGGGGCGGTGACGCTGTATCAGGACGCGCACGTGCCAGAGGCGATGTTGCCGGAGGTTGAGTTAGAGGAGGGTGTGGTGTTTGAGCATGGGAGGTGCTGGGAAGATATATGCCACGCTATTTTGGAAGCGCACCATTTGGTTTACATTGTGGGTTGGTCCATCTACCACAAGGTTAGGCTCGTGAGAGAGCCTACCAAACCCTTACCAAGCGGTGGTAGTTTGAATTTGGGGGAGTTGCTGAAGTACAAGTCCCAAGAAGGTTTGCGAGTTTTACTTTTGGTTTGGGATGATAAGACTTCGCACAGCAAGTTTTTCATTAACACGGCTGGAGTAATGCAAACACATGATGAAGAAACTCGAAAGTTTTTCAAGCATTCTTCAGTTAGATGTTTACTGTCACCCAGATATGCCAGCAGTAAGCTTAGCATTTTCAGGCAGCAGGTCGTTGGAACGCTCTTTACACATCATCAGAAATGTGTGATTGTGGATACTCAAGCACATGGCAATAATAGGAAGATAACTGCATTTATAGGTGGTCTAGATCTTTGTGATGGCCGCTATGATACACCTGAGCACAGACTTTTTCGCGATATTGACACTGTTTATCAGGACGATTATCATAACCCCACTTTTTGCACGGGAACCAAAGGTCCAAGGCAACCATGGCATGATTTACATTGCAAAATTGAAGGCCCTGCTGCATATGATATACTCGCTAATTTTGAGCAGCGTTGGAAAAAGGCCACGAGATGGTCTGAGTTGGGTCGAAAGCTCAAAAGAGTGTCTCACTGGCACGATGATTCTTTGATCAAGTTAGAACGCATCTCTTGGATCCTTAGTCCTTCAGAATTAATTCAAACTGATGATCCTGAACTCTGGGTTTCGAAGGAAGGCGATCCTAAAAATTGGCATGTTCAGGTTTTTCGATCCATAGATTCTGGCTCTTTGAAAGGATTTCCTAAGGATGTATTTGAAGCTGAGACCCAGAACCTTGTGTGTGCAAAAAATCTGGTTATAGACAAGAGTATTCAAACAGCGTATATACATGCCATCAGATCTGCTCAACATTTTATTTATATCGAGAATCAATATTTTGTTGGATCATCCTTTGCTTGGCCAGTTTACAAAGATGCAGGTGCTGATAACCTAATTCCGATGGAGTTGGCACTGAAGATAGTTAGTAAGATACGATCCAAGGAGAGATTTACAGTTTATATAGTCATCCCAATGTGGCCCGAAGGTAACCCTTCCTCTGCTTCTGTGCAAGAGATACTCTTTTGGCAGGCACAAACTATGCAAATGATGTATAGTGTCATAGCTCGGGAATTAAAAGTTATGGAACTTGACCATCATCCACAAGATTATCTCAACTTCTATTGTCTTGGAAACCGAGAGCCGTTGAAAAATGACTTTTTAAGTCCAAGTAGTTCGTCTCCAGATAATGGCGAAACGATTTCAGCCTCACAAAAGTTCCGAAGGTTCATGATTTATGTACATGCCAAGGGAATGATTGTGGATGACGAATATGTAATTCTTGGGTCTGCCAATATCAATCAACGATCTATGGCTGGATCAAGAGACACTGAGATAGCAATGGGTGCGTATCAACCCCATCATACATGGGGTAAGAAAAAGGGACATCCGCATGGTCAGGTATATGGGTATAGGATGTCTTTATGGGCAGAACACATAGGGTGCATACAAGGTTGCTTCAAGGATCCTGAAAGTCTGGAATGCGTGAAAAGTGTGAACAGTATTGCTGAAGATAACTGGAGGAGGTACACATCTGACGATAATAATCCATTGCAAGGGCACCTGTTGAAATATCCTGTGAATATAAATGCCAATGGGAAGGTAAAGTCCATACCTGGATTTGAGTGTTTCCCAGATGTTGGAGGCAAGGTGCTTGGCTCCAGATCCAACCTTCCTGATGCATTAACCACATAG 2544 0.4674 MSQKYSTVVYLHGTLDLVIVEARCLPNMDLLSERVRRFFSALNTCSTSISAKRKLHRARHHHHKIITSDPYVTVCLAGATVARTRVISNSQSPAWDEHFKIPLAHPAAQVDFFVKDNDMFGADLIGIVTISAERILAGGPISDWFPIIGSFGKPPKPDCALCLAMKFTKCEDIRLFRSLKEPDPDRFVVRDSYFPVRHGGAVTLYQDAHVPEAMLPEVELEEGVVFEHGRCWEDICHAILEAHHLVYIVGWSIYHKVRLVREPTKPLPSGGSLNLGELLKYKSQEGLRVLLLVWDDKTSHSKFFINTAGVMQTHDEETRKFFKHSSVRCLLSPRYASSKLSIFRQQVVGTLFTHHQKCVIVDTQAHGNNRKITAFIGGLDLCDGRYDTPEHRLFRDIDTVYQDDYHNPTFCTGTKGPRQPWHDLHCKIEGPAAYDILANFEQRWKKATRWSELGRKLKRVSHWHDDSLIKLERISWILSPSELIQTDDPELWVSKEGDPKNWHVQVFRSIDSGSLKGFPKDVFEAETQNLVCAKNLVIDKSIQTAYIHAIRSAQHFIYIENQYFVGSSFAWPVYKDAGADNLIPMELALKIVSKIRSKERFTVYIVIPMWPEGNPSSASVQEILFWQAQTMQMMYSVIARELKVMELDHHPQDYLNFYCLGNREPLKNDFLSPSSSSPDNGETISASQKFRRFMIYVHAKGMIVDDEYVILGSANINQRSMAGSRDTEIAMGAYQPHHTWGKKKGHPHGQVYGYRMSLWAEHIGCIQGCFKDPESLECVKSVNSIAEDNWRRYTSDDNNPLQGHLLKYPVNINANGKVKSIPGFECFPDVGGKVLGSRSNLPDALTT 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03716 847 PANTHER PHOSPHOLIPASE D 6 837 IPR015679 -
Viun9g03716 847 SMART C2_3c 14 144 IPR000008 -
Viun9g03716 847 CDD C2_plant_PLD 8 168 - -
Viun9g03716 847 SMART pld_4 693 720 IPR001736 GO:0003824
Viun9g03716 847 SMART pld_4 350 385 IPR001736 GO:0003824
Viun9g03716 847 Pfam PLD-like domain 547 729 IPR025202 -
Viun9g03716 847 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 350 385 IPR001736 GO:0003824
Viun9g03716 847 Pfam C2 domain 13 147 IPR000008 -
Viun9g03716 847 SUPERFAMILY Phospholipase D/nuclease 539 778 - -
Viun9g03716 847 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 10 167 IPR035892 -
Viun9g03716 847 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 693 720 IPR001736 GO:0003824
Viun9g03716 847 Pfam Phospholipase D C terminal 769 837 IPR024632 -
Viun9g03716 847 SUPERFAMILY Phospholipase D/nuclease 184 458 - -
Viun9g03716 847 FunFam Phospholipase D delta 222 466 - -
Viun9g03716 847 FunFam Phospholipase D 509 739 - -
Viun9g03716 847 PIRSF PLD_plant 1 847 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Viun9g03716 847 Gene3D Endonuclease Chain A 225 468 - -
Viun9g03716 847 Gene3D C2 domain 11 175 IPR035892 -
Viun9g03716 847 Pfam Phospholipase D Active site motif 351 385 IPR001736 GO:0003824
Viun9g03716 847 Gene3D Endonuclease Chain A 519 739 - -
Viun9g03716 847 ProSiteProfiles C2 domain profile. 1 145 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03716 Viun-Chr9 42309886 42316262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03716 1 676 Phospholipase D Gene Family (Wang group) AT4G35790 65.224 0.0 937
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03716 K01115 - gmx:100795859 1545.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03716 9 42309886 42316262 Viun9g03716 9 42309886 42316262 ECH