Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03701 ATGGCATCATCATCGCCATGTGACTATTGGCCCCATCTTTCTCATACACTCTCTTCTTCTCCTTCTCCTTCTCCTTCTTCTTCTTCACCCTCTCACACCCTTCTTCCTCCACCTCCTTCCTCCGTTGAACATGTCTGGAACGACCTCAAACTCCCCTCGCTCTCCAACTCCCCCGTTGACTTCAACCACTCTTCTTCTCATTCCTCTCTCCTCTCTCTCTCTTCCTCGCACAACCACCACTCGCTTCTCTCTGTCTCCAACGCCTCCTTCCATTCCAACCACCAAGATCATCGCCATAGCCGCATCATGAAGAATCGAGAATCCGCGGTTCGCTCCAGAGCCAGAAAACAGGCTTATCGAAAAGGCTTGGAAGTTGAAATTGCTCGTTTGACGGAAGAGAATTCGAGACTAAGAAAAGAATTGAAAGAGTTGCAGTGTTCTTTGTCTTCCTCAGAGAATACCCCTCAAAGAACCAGTGCTCCCTTTAGAACCTCGTCATCTCCATTTTGA 510 0.4863 MASSSPCDYWPHLSHTLSSSPSPSPSSSSPSHTLLPPPPSSVEHVWNDLKLPSLSNSPVDFNHSSSHSSLLSLSSSHNHHSLLSVSNASFHSNHQDHRHSRIMKNRESAVRSRARKQAYRKGLEVEIARLTEENSRLRKELKELQCSLSSSENTPQRTSAPFRTSSSPF 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03701 169 Coils Coil 120 154 - -
Viun9g03701 169 Gene3D - 96 151 - -
Viun9g03701 169 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 65 146 IPR043452 GO:0003700|GO:0045893
Viun9g03701 169 CDD bZIP_plant_BZIP46 97 151 - -
Viun9g03701 169 MobiDBLite consensus disorder prediction 85 113 - -
Viun9g03701 169 SUPERFAMILY Leucine zipper domain 97 146 IPR046347 GO:0003700|GO:0006355
Viun9g03701 169 MobiDBLite consensus disorder prediction 14 42 - -
Viun9g03701 169 FunFam BZIP transcription factor bZIP46 95 151 - -
Viun9g03701 169 SMART brlzneu 93 157 IPR004827 GO:0003700|GO:0006355
Viun9g03701 169 Pfam bZIP transcription factor 96 145 IPR004827 GO:0003700|GO:0006355
Viun9g03701 169 MobiDBLite consensus disorder prediction 92 113 - -
Viun9g03701 169 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 95 145 IPR004827 GO:0003700|GO:0006355
Viun9g03701 169 MobiDBLite consensus disorder prediction 146 169 - -
Viun9g03701 169 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 101 115 IPR004827 GO:0003700|GO:0006355
Viun9g03701 169 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03701 Viun-Chr9 42202152 42203997 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03701 60 169 bZIP Transcription Factor Family AT3G56850 41.818 1.13e-14 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun9g03701 bZIP_1 5.5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03701 K14432 - vra:106761574 234.572