Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03692 ATGGATTCTTCTTCACTCATGTTACCGTTGTTGTTGATGATGATTTTGTGCAAAACGATTGGTGCAGTGCAACTTCCACCAAATTTTACGGTTCCTGCAGTGTTGGTGTTCGGAGATTCGATAATGGACACTGGCAACAACAACAACATAACGCAAACGCTTGCGAAATGCAATTTCCCTCCCTATGGTAGAGACTTCCAAGGAGGCATTCCAACCGGTCGATTTGGTAACGGAAAGGTTCCTTCCGACCTTATAGCTGAAGAACTAGGCATTAAAGATCTTCTACCACCATATTTCGATCCAAATCTCCAACCTAATGATCTACTCACTGGTGTTTGTTTTGCATCCGGTGGTTCAGGCTACGATCCTCTCACTGCTAAAATGGCGACAGCTATATCATTGTCCGGTCAAATAGACATGTTCAAAGACTACATAAGAAAGCTCGAAAAACTTGTCGGGGAGGAGAGAACCAACTTCATCCTAGCCAATAGCATTGTCCTTGTGGTGGAAGGCAGCAACGACATTTCCAACACTTACTTTTTGACTCACGCTAGAGAACTGCAATATGATATTCCTACTTATACTGACCTAATGGTTAGCTCAGCTTCAAGTTTCTTAAAGGAAATATATCAACTAGGTGCTCGGAGGATAGGAGTATTGAGTGCCCCACCAATTGGGTGTGTGCCATTTCAGAGAACAATTTTGGGAGGATTGCTAAGAAAATGTGCAGAAAAGTATAACGATGCGGCCAAGTTATTCAACATCAAACTTGCAAAGGAATTGGATTCTCTTAATCAAAATTTGCCTAATGCCAGGATGGTTTACCTTGATGTTTACAACCCTCTACTTGATATCATTCTAAATTACCAAAATTATGGTTTTAAAGTGGGAGACAGAGGATGTTGTGGTACGGGAAAAATAGAGACTGCAGTGTTCTGCAACTCTTTGGACCCCACGTGTCAGAATGTGGGAGACTACGTTTTTTGGGATGGTTTTCATCCTTCGGAAAGTGTTTACAGAAAGCTCGTACCTCCTATTCTCCAGAAATATTTGGTCCAGTTCGTCTGA 1068 0.4195 MDSSSLMLPLLLMMILCKTIGAVQLPPNFTVPAVLVFGDSIMDTGNNNNITQTLAKCNFPPYGRDFQGGIPTGRFGNGKVPSDLIAEELGIKDLLPPYFDPNLQPNDLLTGVCFASGGSGYDPLTAKMATAISLSGQIDMFKDYIRKLEKLVGEERTNFILANSIVLVVEGSNDISNTYFLTHARELQYDIPTYTDLMVSSASSFLKEIYQLGARRIGVLSAPPIGCVPFQRTILGGLLRKCAEKYNDAAKLFNIKLAKELDSLNQNLPNARMVYLDVYNPLLDIILNYQNYGFKVGDRGCCGTGKIETAVFCNSLDPTCQNVGDYVFWDGFHPSESVYRKLVPPILQKYLVQFV 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03692 355 Pfam GDSL-like Lipase/Acylhydrolase 34 342 IPR001087 GO:0016788
Viun9g03692 355 Gene3D SGNH hydrolase 26 349 IPR036514 -
Viun9g03692 355 SUPERFAMILY SGNH hydrolase 34 349 - -
Viun9g03692 355 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 34 45 IPR008265 GO:0006629|GO:0016298
Viun9g03692 355 FunFam GDSL esterase/lipase APG 23 351 - -
Viun9g03692 355 CDD SGNH_plant_lipase_like 32 350 IPR035669 -
Viun9g03692 355 PANTHER GDSL ESTERASE/LIPASE EXL3 17 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03692 Viun-Chr9 42145715 42149866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03692 28 348 Pollen Coat Proteome AT1G75910 42.284 3.32e-81 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03692 - - gmx:100793604 607.831