Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03656 ATGCCAATCTCAATGTCAGAAGGAGGACTTGCAAAATGCACCAGAATCCGGCACATCGTCAGGCTCCGCCAAATGCTGCGGCGGTGGCGCAGCAAGGCCCGCATGTCGGCCCACCGAGAAGTACCCTCCGATGTTCCGGCGGGACACGTGGCAGTGTGCGTGGGCAGCAACTCCAGGAGATTTGTGGTACGTGCCACCTACCTGAACCACCCCGTGTTCCAGAAGCTACTAGTGGAGGCGGAGGAAGAGTACGGATTCTCACACCACGGTCCTCTCGCCATTCCCTGCGACGAAACACTCTTCGAACACCTCCTCCGCTTCATTTCACGATCCGATCCCCCTCCCTCCAACCGCTTCGACGACTGTCACGTCCCTCTCATAAACAACCTCGACTTCTGCCTCCAATCTCGACCACTGCTCCACTGA 426 0.5822 MPISMSEGGLAKCTRIRHIVRLRQMLRRWRSKARMSAHREVPSDVPAGHVAVCVGSNSRRFVVRATYLNHPVFQKLLVEAEEEYGFSHHGPLAIPCDETLFEHLLRFISRSDPPPSNRFDDCHVPLINNLDFCLQSRPLLH 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03656 141 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 31 104 IPR003676 GO:0009733
Viun9g03656 141 Pfam Auxin responsive protein 21 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03656 Viun-Chr9 41925579 41926287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03656 10 140 Calmodulin-binding Proteins AT4G34750 48.611 8.03e-42 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03656 K14488 - gmx:100789753 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03656 9 41925579 41926287 Viun9g03656 9 41925579 41926287 ECH
Viun8g00125 8 751944 753046 Viun9g03656 9 41925579 41926287 PCT