Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03653 ATGCGCCGATTGCAAAAATCCAAAAGAGTTTCATGGGCCTCCGATTTAGATCTTTGTCAGGTTAGGCTATTCTTATCAGAAGATTCCCCTTCACAGGTTGGATTAAATTCTCAAGATCACCTCCAAGCTAAGGCATCATTGCAGTTGCCTGCAGGTGGGCCAGGTTCCGATGACATTCTGCCTCCTGGATTTGAGGGAACTCATACTTCATGTCAGTTTGAGATTAAGCCATCTCAAATACCAGTTATTAAGTGGATTATTCCTCCAAAGATTGTGCTAGATCTCACATGGCAAGTAGTGTGTGGGGAAGAAAGCAAAGAGGTAGAGGATCAACGTCAGAGGGAGATGAGAGTACTTGAAGCTATTTATCCTCGCACATCATCCATTCCTCCGAACCCTTCCGTTTCAGTGGATGTTGAAGATTCAAATTACATGGATGGTCAAGCTGCTCTGATACCAATAACGGCAATTGAAGATGAAGATGCAGCACCAGATGCATTATCGGATTCCATGGAACCAGTTGATGCTTCACAATCCCTTGAATTACCTCCTGGTATGTTGAAGAATTCAAACTCTGCCACAAGTACGCAATATGCTCGTGGTCTGACATCTGATGTAGCTGCTGCATCTGTTGCTTTAACTAACATTGTGAGGAGCAACGAACAAGGGAAATTGATTGACCATGAATTACTTAATAATATTCTCAGCAATCCAGAAGTGATTGAGAAACTGGTTAGAGATTATGGAGCTACTAATAATTCGCAATATGTACATAATGTGGGGTCTTCCAGTGCGGTTTTTTCAAATCCTCATATTCCTGTTATTCAAGGAGAAACCGCCACACCTTCATCGATTGCTTTCCCAGCCACTTCTTCGTATACACCATCCACCGGAGGTCAGGTGGCACCTGTTTCTACCCAATGGCCTCCTAGGCCTGCAGCCAGTTCAGCTGTTGTTTCTTCTCCTGTTGAAGTTCCTGCTGCGAAAGATGTTAACTACTATAAGAGTTTAATTCAGCAACATGGTGGAGATAAACAAGAAACACTTCCATATTCCAGTAAACGTCAGATTCACCAGCCAGTAACAAGTTATGAGCCAACATACAATCAAAGAGCTAAAGTGTCAAAACCAAAGATAATGAAGCCTTGTATCTTTTTCAACAGTTCTAGAGGATGCCGGAATGGAGCCAACTGTGCCTACCAGCATGACGCCTCATTTCAGCCACGAGGTAATAACGTGCCGGGGATACAAAGTTCAAAGAGGATGAAAATGGATCATGAGATTAGCAGTTGA 1293 0.43 MRRLQKSKRVSWASDLDLCQVRLFLSEDSPSQVGLNSQDHLQAKASLQLPAGGPGSDDILPPGFEGTHTSCQFEIKPSQIPVIKWIIPPKIVLDLTWQVVCGEESKEVEDQRQREMRVLEAIYPRTSSIPPNPSVSVDVEDSNYMDGQAALIPITAIEDEDAAPDALSDSMEPVDASQSLELPPGMLKNSNSATSTQYARGLTSDVAAASVALTNIVRSNEQGKLIDHELLNNILSNPEVIEKLVRDYGATNNSQYVHNVGSSSAVFSNPHIPVIQGETATPSSIAFPATSSYTPSTGGQVAPVSTQWPPRPAASSAVVSSPVEVPAAKDVNYYKSLIQQHGGDKQETLPYSSKRQIHQPVTSYEPTYNQRAKVSKPKIMKPCIFFNSSRGCRNGANCAYQHDASFQPRGNNVPGIQSSKRMKMDHEISS 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03653 430 ProSiteProfiles Zinc finger C3H1-type profile. 377 405 IPR000571 GO:0046872
Viun9g03653 430 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 265 425 - -
Viun9g03653 430 MobiDBLite consensus disorder prediction 409 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03653 Viun-Chr9 41905556 41910980 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Viun9g03653 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03653 - - gmx:100783321 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03653 9 41905556 41910980 Viun9g03653 9 41905556 41910980 ECH