Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03626 ATGGCTGATTCTGGCTCAGCCTCCTCTTCCTCCAGAATGTGGTGCTCCGTCCCGGAACGGGTTCAGCTGCATGCGGCCATGTTGGCCCTGCAGTTTGGCTACGCCGGATTCCACGTCGTCTCAAGAGCTGCCCTTAACATGGGCATTAGCAAACTCGTTTTCCCAGTCTACCGCAACGTTATTGCCTTATTCCTGCTCCTTCCTTTTGCCTACTTCTTGGAAAAGAAGGAGAGACCTGCCATTACTTTAAACCTCCTCTTACAGTTCTTTCTTCTGGCGCTTGTCGGGATCACTGCCAACCAGGGTTTCTACTTGCTTGGATTGGACAACACATCCCCAACCTTTGCATCAGCGATACAAAACTCTGTCCCAGCCATTACATTTCTGATGGCAGCCATATTCAGGATAGAGCAAGTTCGGCTGAACCGAAAGGATGGGATAGCGAAGGTTGCGGGAACAGTGTTCTGTGTGGCTGGGGCATCGGTGATTACCCTATACAAGGGTCCAACCATATATAGCCCAACTCCACCACTGAACGCTAGCCCAGTAATTGAGTTTGGTTCAGTCTCACTGGGAGATGCAAAGGGAAAGAACTGGACCCTAGGGTGCCTCTATCTCATAGGACACTGCTTGTCCTGGTCTGGTTGGCTTGTGCTGCAAGCACCTGTAATCAAGAAGTACCCTGCTCGTCTCTCTCTCACTTCCTATACATGTTTCTTTGGCCTCATCCAATTCTTCGTCATTGCTCTCATCGTTGAAAGAGATGCTCAGGCTTGGATTTTCCAATCTGGTGGAGAGGTTTTCACCATCATCTATGCGGGAGTGGTGGCATCTGGAATTGCCTTCGCTGTTCAGACATGGTGCGTCGACAGAGGTGGACCTGTGTTCGTTGCGGTGTATCAACCTGTTCAAACTCTTGTTGTCGCTATCATGGCTTCCCTTGCTTTAGGCGAAGAGTTCTACTTGGGAGGGATCATAGGAGCAGTGTTGATCGTTGTGGGACTGTACTTTGTGCTGTGGGGCAAAAACGAAGAGAGAAAGTTTGCAAGGGAACAGGCTGCGATTACGTCCTCCACCCCAGAGCACAGTGGCATCAGATCCGCAAGCCATGCCAAAACATCACTCACTGAGCGTCTTCTTCTCCCTCCATCTACGGAGAACGTGTGA 1167 0.5047 MADSGSASSSSRMWCSVPERVQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNVIALFLLLPFAYFLEKKERPAITLNLLLQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAAIFRIEQVRLNRKDGIAKVAGTVFCVAGASVITLYKGPTIYSPTPPLNASPVIEFGSVSLGDAKGKNWTLGCLYLIGHCLSWSGWLVLQAPVIKKYPARLSLTSYTCFFGLIQFFVIALIVERDAQAWIFQSGGEVFTIIYAGVVASGIAFAVQTWCVDRGGPVFVAVYQPVQTLVVAIMASLALGEEFYLGGIIGAVLIVVGLYFVLWGKNEERKFAREQAAITSSTPEHSGIRSASHAKTSLTERLLLPPSTENV 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03626 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 57 167 - -
Viun9g03626 388 PANTHER WAT1-RELATED PROTEIN 25 352 IPR030184 GO:0016020|GO:0022857
Viun9g03626 388 Pfam EamA-like transporter family 27 164 IPR000620 GO:0016020
Viun9g03626 388 Pfam EamA-like transporter family 201 339 IPR000620 GO:0016020
Viun9g03626 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03626 Viun-Chr9 41695952 41699137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03626 1 388 Nodulin-like Gene Family AT1G75500 73.028 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03626 - - gmx:100786714 669.848