Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03608 ATGGCATCATCAAGTGGAAACTCTTCTTCCTGCACCAAGATTCAAAGCTCGGGCTCTGAAGGAGATTTGCAGGTTGTGACGATGGACGAGAGAAAGAACAAGAGAAAACAATCGAATCGTGAATCTGCGAGAAGATCTCGGATGCGAAAGCGTGACCACCTGGAAGACCTGAGGAAGCAAGTGTCAGAGTTGAGAAAGGAGAACAGGGAAATCATGGCGACCATTGACATGACCACACAACACTATCTGAAAACGGAGGCTGAAAACTGCGTTCTGAGGGCCCAGATGGGTGAGCTTAACCAACGCTTCCAATCGCTGAACGACATCATCGTGGACATCATCAACACAAACACCTCCTACGAAAGGGACTGTTATTATCTAACGAGTTCACAAAATTTTACCAACACTTTCTGTCTCAACCAACCTGTTTTTCAGTGGTGA 441 0.4626 MASSSGNSSSCTKIQSSGSEGDLQVVTMDERKNKRKQSNRESARRSRMRKRDHLEDLRKQVSELRKENREIMATIDMTTQHYLKTEAENCVLRAQMGELNQRFQSLNDIIVDIINTNTSYERDCYYLTSSQNFTNTFCLNQPVFQW 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03608 146 CDD bZIP_plant_GBF1 32 82 IPR045314 GO:0003700|GO:0006355
Viun9g03608 146 PANTHER BZIP TRANSCRIPTION FACTOR 44 10 125 - -
Viun9g03608 146 MobiDBLite consensus disorder prediction 1 58 - -
Viun9g03608 146 Coils Coil 40 74 - -
Viun9g03608 146 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
Viun9g03608 146 Pfam bZIP transcription factor 31 84 IPR004827 GO:0003700|GO:0006355
Viun9g03608 146 SUPERFAMILY Leucine zipper domain 31 83 IPR046347 GO:0003700|GO:0006355
Viun9g03608 146 MobiDBLite consensus disorder prediction 1 23 - -
Viun9g03608 146 FunFam BZIP transcription factor 29 80 - -
Viun9g03608 146 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Viun9g03608 146 Gene3D - 29 84 - -
Viun9g03608 146 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 76 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03608 Viun-Chr9 41596298 41597512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03608 2 95 bZIP Transcription Factor Family AT1G75390 63.918 1.56e-32 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun9g03608 bZIP_1 1.7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03608 K25786 - gmx:778188 201.445