Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03605 ATGGAAGCCCCTGATTGTATCTATCGTGGCCAAGTAGTGAGCATTCTCCCAAGTGCTCCTACCCCAAAACATTCTCTCTACTTGTCCAATCTCGACGACCAAAACTTCTTAAGGTTCTCCATCAAATACTTGTACCTCTTCAAAAACTCCTTCAACTTGGACTTGTTGAAGTCTTCTCTCGCCAGAGTTCTAGTGGATTATTACCCCTTGGCCGGTCGCTTGAGAACCGTCGATGATCACAAGCTTGAGGTCGATTGCAATGGACAAGGTGCTCTCTTTGCCGAGGCTTTCACTCACACCACTCTTCATCAACTTCTCGAATCTTCCAAGACTCCAAACAAGTCTTGGAAGAAGTTCTTGTACAAGGTCGAAGCTCACTCTTTCGTCGATGTTCCTCCTCTCGTAGTCCAGGTAACGAAACTGGGTTGCGGAGGAATGATCCTGTGCACGGCGATCAACCACTGCGTGTGCGACGGCATAGGCACGTCCCAGTTCCTACACGCTTGGGCACAGCTGACGAAAACGCCAGAAGCGGAATTGACGATCGTGCCCTTCCACTGGCGCCACGTGCTGAAACCCAGACACCCCGCGCAGGTAAAGTTCCGTCACGGTGGCTACACCGCATCAAACCCAACCCCTCAAGTGGACCTCCTAAAGTTGATACAGTCACAGCCCCTGGTACCCACGTCCTTCACCCTCACCCCCTCCCACGTCCTTGGCCTCAAGAAACAGTGCGTCCCTTCCCTGAAGTGCACCTCCTTCGAAACCGTTGCGGCTCACACCTGGCGCTCTTGGATTCGCTCAGTGGGCCAATCCCTACCGTCCAAACTCCTTGTGAAGCTACTTTTCTCGGTCAACGTCAGAACAACAGTTGACCTTCCGCAGGGGTATTACGGGAACGGATTCTTGCTAGCGTGCGCCGAGAGCAGCGTGGAGGACTTAGTGGACGGTAACCTGCGCCACGGGGTGAGGCTTGTGCAGGAAGCCAAGGCGAGGTTGAAGGAGGAGGAGTACGTAAGGTCAATGGTTGACCTGTTGGAGGACAAAACTGTAAAAACGGATCTTTCGACGAGTTTGGTTATTTCGCAGTGGGCGAGACTGGGGTTGGAAGAGGTGGATTTTGGGGAAGGGAAACCTTTGCATATGGGTCCTTTGACTAGTGATATTTACTGTTTGTTCTTACCCGTCGCCGGTGACGCTAATGCCGTGCGAGTGCTGCTGTCTGTCCCCGAGACCATGGTGGAACGTTTTCAGTATCACATGATGAGACAAAGCTGGGAAGAAGAAGAAGAAAACGGATTCTTCTGA 1308 0.5214 MEAPDCIYRGQVVSILPSAPTPKHSLYLSNLDDQNFLRFSIKYLYLFKNSFNLDLLKSSLARVLVDYYPLAGRLRTVDDHKLEVDCNGQGALFAEAFTHTTLHQLLESSKTPNKSWKKFLYKVEAHSFVDVPPLVVQVTKLGCGGMILCTAINHCVCDGIGTSQFLHAWAQLTKTPEAELTIVPFHWRHVLKPRHPAQVKFRHGGYTASNPTPQVDLLKLIQSQPLVPTSFTLTPSHVLGLKKQCVPSLKCTSFETVAAHTWRSWIRSVGQSLPSKLLVKLLFSVNVRTTVDLPQGYYGNGFLLACAESSVEDLVDGNLRHGVRLVQEAKARLKEEEYVRSMVDLLEDKTVKTDLSTSLVISQWARLGLEEVDFGEGKPLHMGPLTSDIYCLFLPVAGDANAVRVLLSVPETMVERFQYHMMRQSWEEEEENGFF 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03605 435 Gene3D - 219 421 IPR023213 -
Viun9g03605 435 Gene3D - 10 208 IPR023213 -
Viun9g03605 435 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 15 418 - -
Viun9g03605 435 SUPERFAMILY CoA-dependent acyltransferases 11 184 - -
Viun9g03605 435 Pfam Transferase family 15 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03605 Viun-Chr9 41573239 41576068 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03605 15 384 Monolignol Biosynthesis Gene Families AT5G48930 31.407 3.51e-48 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03605 - - var:108341288 828.165