Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03566 ATGTCCAAACGATTCAAATTCAAATTCAATGTCCCTTCCTTTCAAATATGTCGCTCAAAAGATCTTTCTTCTTTCCCAGGAAACCCCGTTCCTGCCATATACCGTCTCTCTCCCGTTAACCACAACGCACGTTATCCCAACCTTCCTTCTCCGTCATCGTCCAAGATAACGTCGTCCATTTCGCAGGGGTGCAACATGTGCCGTGACAAGGAGCCCAAGAAAGCGAGATCCAGAAGCCGGAAAGGCACGTCGAGCGTTCCGTCGAGGCGAAGCGATTTTCTAATGGACAGCGTCGAGGAAGAGGAAAGCGAGACTCTGATTTCTTGCTTGACGAGTTTCTCCGACGAGATTTGTCACGACGAGGTGAGAGATTTGAGAAACAGTAGGCACAGGAGGAAGACGAGCAGCGTGAAGAAGGTTCAGAGCGTGAGGTTTCGGAGCTCTTCGGAGAATCGAGGAGGAGCGGGAACGACGGAGAAGGTGAAGAAGGCGTCGACGACGGTGACGCGGAGCAATGTTGAGGGGAAGGTGAGGGAGAGCTTTGCGGTGGTGAAGAAGTCGAAGGATCCTTACGAAGACTTCAAGAAATCGATGATGGAGATGATAACGGAGATGGAGATGTCTGAGGCGGAAGACCTGGAACAGCTTTTGCAGTGTTTCTTGGCGTTGAACTCGCGGAGTTACCATGCAGTCATCGTTAGAGTTTTCATGGAGATTTGGCAACAAATGTTCGTGTGGAACCCAAAGTCCGTGAAAAATCTCACGGACGTTAAAAATGATGCGGAGAAGTAA 792 0.4987 MSKRFKFKFNVPSFQICRSKDLSSFPGNPVPAIYRLSPVNHNARYPNLPSPSSSKITSSISQGCNMCRDKEPKKARSRSRKGTSSVPSRRSDFLMDSVEEEESETLISCLTSFSDEICHDEVRDLRNSRHRRKTSSVKKVQSVRFRSSSENRGGAGTTEKVKKASTTVTRSNVEGKVRESFAVVKKSKDPYEDFKKSMMEMITEMEMSEAEDLEQLLQCFLALNSRSYHAVIVRVFMEIWQQMFVWNPKSVKNLTDVKNDAEK 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03566 263 MobiDBLite consensus disorder prediction 143 165 - -
Viun9g03566 263 ProSiteProfiles OVATE domain profile. 183 242 IPR006458 -
Viun9g03566 263 Pfam Transcriptional repressor, ovate 187 244 IPR006458 -
Viun9g03566 263 MobiDBLite consensus disorder prediction 45 65 - -
Viun9g03566 263 MobiDBLite consensus disorder prediction 45 97 - -
Viun9g03566 263 NCBIfam uncharacterized plant-specific domain TIGR01568 181 243 IPR006458 -
Viun9g03566 263 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 77 244 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03566 Viun-Chr9 41379797 41380950 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Viun9g03566 Ovate 5.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03566 - - gmx:102662518 348.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03566 9 41379797 41380950 Viun9g03566 9 41379797 41380950 ECH