Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03557 ATGACTTCCGACGGAGCGACATCGGCGGCGATCACCAATCGGCGGAAGCCGTCCTGGAGGGAGAGAGAGAACAACAGGAGGAGAGAGAGGCGGAGAAGAGCCATAGCCGCGAAGATATACACTGGTCTCCGCGCTCAGGGGAACTACAATTTACCCAAACATTGCGACAACAATGAGGTTTTGAAGGCTCTCTGCGCTGAAGCTGGTTGGACTGTTGAAGAAGATGGTACAACCTATCGCAAGGGATGCAGGGCACCACTTCCAGGTGATGGTGCTGGCACCTCCACCAGAAACACCCCTTTTTCATCGCAAAATCCGAGTCCCCTCTCATCGTCATTTCCGAGTCCAATTCCTTCCTACCAAGTGAGCCCCTCCTCTTCCTCTTTCCCGAGTCCCTCTCGTTTGGATGACAACAATGCCTCAAATTTGATTCCCTATATTCGACATTCGTTCTCTGCTTCTCTCCCTCCCCTGAGGATATCAAATAGCGCCCCAGTGACCCCGCCTTTGTCCTCACCAACTTCAAGAAACCCCAAACCAATCCCAACATGGGACTCCATAGTCAAAGCCTCCATGGCATCATCCTTCAACCACCATCATCATCACCACCAAAATCACCCTTTCTTCGCGGCTTCTGCCCCTGCTAGCCCCACACACCGCCACCTTCATGCCCCGCCCACTATTCCCGAATGTGACGAGTCTGATACCTCCACTGTTGAGTCTGGCCAGTGGTTGAACTTCCAAGCATTTGGACCTTCTGTTTCTGCAGTGCCCATCTCTCCCCCCTTGAACTTTATCAAACCTGTTGTGAGTCAGCAGCACCAACACAACCTTAACCACCCTGATAACCGTATCCAAGAGATGAGAAACTCAGAAGTGCAATTTGGAGTGCAGGTGAAGCCCTGGGTTGGGGAGAGGATTCATGAAGGTGGATTGGATGATTTGGAGCTCACACTAGGAAGCGGGAAGACGCTTGCTTAG 981 0.5219 MTSDGATSAAITNRRKPSWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWTVEEDGTTYRKGCRAPLPGDGAGTSTRNTPFSSQNPSPLSSSFPSPIPSYQVSPSSSSFPSPSRLDDNNASNLIPYIRHSFSASLPPLRISNSAPVTPPLSSPTSRNPKPIPTWDSIVKASMASSFNHHHHHHQNHPFFAASAPASPTHRHLHAPPTIPECDESDTSTVESGQWLNFQAFGPSVSAVPISPPLNFIKPVVSQQHQHNLNHPDNRIQEMRNSEVQFGVQVKPWVGERIHEGGLDDLELTLGSGKTLA 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03557 326 MobiDBLite consensus disorder prediction 1 31 - -
Viun9g03557 326 MobiDBLite consensus disorder prediction 79 136 - -
Viun9g03557 326 MobiDBLite consensus disorder prediction 92 136 - -
Viun9g03557 326 Pfam BES1/BZR1 plant transcription factor, N-terminal 13 142 IPR008540 -
Viun9g03557 326 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 5 324 IPR033264 GO:0003700|GO:0006351|GO:0009742
Viun9g03557 326 MobiDBLite consensus disorder prediction 15 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03557 Viun-Chr9 41324699 41327058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03557 1 323 BZR Transcription Factor Family AT1G75080 64.516 1.88e-119 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Viun9g03557 BES1_N 1.6e-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03557 K14503 - gmx:100803869 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03557 9 41324699 41327058 Viun9g03557 9 41324699 41327058 ECH
Viun8g00239 8 1480962 1483096 Viun9g03557 9 41324699 41327058 PCT