Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03539 ATGGCATCAAGTTTAACTGTATCTTCTCTATTGGTGCACCTGCAATCCTCGTCAAAGATAAGAGCCTGCAAGTGGAAGAGCTCCTCCTCCATGCGTGCTTTTACAACCAAAGCTTCAGTCTCTGAAACGACGTCGTTGCCGGCGTCGGAGACGGCCAAGCTCCCGCTGCGCGAAATTCCGGGAGACTACGGTCTCCCTTTCGTAGGACCCATCAGCGACCGGCTCGACTATTTCTACAACCAAGGCCGCGACGTCTTCTTCCGATCCCGCGCCCAGAAGTACAACTCCACCGTCTTCCGCGTCAACATGCCACCCGGCCCCTTCAACAGCTCCGACCCAAGAGTCATCGTTTTGCTCGATGCCAAAAGCTTCCCCGTCCTCTTCGACATGACAAAAGTAGAAAAACGTGACCTCTTCACCGGCACCTACATGCCTTCCCTCGAACTAACCGGCGGTTACCGAATCCTCTCCTACATCGACCCCTCCGAACCCAAACACGAAACACTGAAACGCTTCATCTTCTTCCTTCTCAAACACCGAAGCAGCCACGTCATTCCCGAGTTCCATTCAACCTACACAGCCATGTTCGAAACCCTCGAGAAAGAGCTGGCGGACAAGGGAAAAGCTGCTTTTGGAGACCCCAATGACCAAGCAGCGTTTAACTTCCTGGCTCGCGCGCTTTTTGGCATCAACCCCCCCGACACAAAACTCGGAAGCGACGGACCTTCTATAATACAAAAATGGGTTTTCTTCCAGCTTGGCCCGCTTTTGTCATTGGGCCTTCCCAAATTCATTGAAGATCCCACTCTCCACACCATCCCCCTCCCTCCTTTTTTGATAAAGAGCGACTACCAGAAGCTCTACGATTTCTTCTACGAGTCCGCTGCTGGGGATGTGTTTGACGAAGCGTCGCGTCTCGGTATCTCCAAAGAAGAAGCCTGCCACAACCTCATATTCGCCACCTGCTTTAACTCCTTTGGCGGAATGAAAATTCTGTTCCCCGCCATACTGAAGTGGATTGCAGGAGCGGGCTTGAAATTTCAAGCTCAGCTGGCGGAGGAGGTGAGGGCCGCCGTCAAGGCTAACGGCGGGAAGGTGACGATGGCGGCGTTGGAAGCGATGCCGCTGGTGAAGTCGGCGGTGTACGAGGCGTTGCGCATTGAACCGCCGGTGCCGCTGCAGTACGGTAGGGCGAAGAAGGACTTGGTGATCGAGAGTCACGAGAATTCGTTTTCGGTGAAGAGAGGGGAGATGCTGTTTGGGTTTCAGCCGTTTGCGACTAAGGATCCGAAGATATTTGAGAATGCAGAGGAGTATGTGGGTGATAGGTTCGTGGGGGAGGGAGAGAAGCTGCTGAAATACGTGGTTTGGTCGAATGGTCCTGAGACGGAGAGCACGAGCCTTGGGAACAAACAGTGTGCAGGGAAGGATTTTGTGGTGCTGTTTTCTCGGCTTCTGGTTGTGGAGCTATTTCTTCGTTATGATTCTTTTGAAGTTGAGATTGGATCCTCGCCGTTGGGTGTTTCCGTTAACATAACCTCCCTCAAGAAAGCAACCTCTTAG 1563 0.5285 MASSLTVSSLLVHLQSSSKIRACKWKSSSSMRAFTTKASVSETTSLPASETAKLPLREIPGDYGLPFVGPISDRLDYFYNQGRDVFFRSRAQKYNSTVFRVNMPPGPFNSSDPRVIVLLDAKSFPVLFDMTKVEKRDLFTGTYMPSLELTGGYRILSYIDPSEPKHETLKRFIFFLLKHRSSHVIPEFHSTYTAMFETLEKELADKGKAAFGDPNDQAAFNFLARALFGINPPDTKLGSDGPSIIQKWVFFQLGPLLSLGLPKFIEDPTLHTIPLPPFLIKSDYQKLYDFFYESAAGDVFDEASRLGISKEEACHNLIFATCFNSFGGMKILFPAILKWIAGAGLKFQAQLAEEVRAAVKANGGKVTMAALEAMPLVKSAVYEALRIEPPVPLQYGRAKKDLVIESHENSFSVKRGEMLFGFQPFATKDPKIFENAEEYVGDRFVGEGEKLLKYVVWSNGPETESTSLGNKQCAGKDFVVLFSRLLVVELFLRYDSFEVEIGSSPLGVSVNITSLKKATS 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03539 520 PANTHER CYTOCHROME P450 26 53 494 - -
Viun9g03539 520 CDD CYP74 88 513 - -
Viun9g03539 520 SUPERFAMILY Cytochrome P450 54 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03539 520 FunFam Allene oxide synthase, chloroplastic 54 520 - -
Viun9g03539 520 PRINTS E-class P450 group IV signature 427 445 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03539 520 PRINTS E-class P450 group IV signature 473 491 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03539 520 PRINTS E-class P450 group IV signature 374 390 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03539 520 Pfam Cytochrome P450 347 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03539 520 Gene3D Cytochrome P450 50 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03539 Viun-Chr9 41210221 41212009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03539 37 519 Cytochrome P450 AT5G42650 64.682 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03539 K01723 - gmx:100807192 807.749