Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03535 ATGGAAGCAGCAGCGCTTGTTGTAGTAGCTGTCTTTCTATTACTATGTTACTTCATCAAATGGGATACAGCAGGTTCTACTCGCAAGCCACCGGAAGCAGCCGGTGGCTGGCCTTTGATCGGCCACCTTCGCCTCTTTAGTCGCTCCGGTCAGCCTGTATACGAAGCCCTAGGAGGCTTAGCAGACAAATATGGCCCAATATTCAGCATCAGAATGGGTGTGCATCAGGCGGTAGTGGTGAGCTCTTGGGAGTTAGCGAGGGAGTGTTTCACCACTCTGGACGCTGTTGTCTCATATCGTCCCAAATACAGCGCCGCAAAAATCTTGACATACGACTATGCTAGTTTTGCGTTCTCCCCTTACGGAGACTTCTGGCGCGACATGCATAAGATTACTGTTTCGGAGCTATTTTCTACCCGACGTGCTGAACTGCTTCGAGGAATTAGAGATTCGGAGGTGCGGAGCTCGTTGAAAGAACTATACGGAACGTGGGTGGAGAAAAGAGGTGATTTGTTGGTGGAGATGAAGGAGTGGTTCGGGAACATGAATCTGAACATGATACTGAGGACGGTTGCGGGAAAGCGATACTGTGTGGGGAATGGAGATGAGGAACGGATGAGACGGGTTCGGAGGGTACTGAGAGATTTCTTTAACTTGTTGGGGGTGATTGTGATTGGGGATGCGATTCCATTTCTTGGGTGGCTTGATTTGGGAGGTGAAGTGAAGGAGATGAAAAAAACGGCTGTAGAAATGGATAGCTTGATTTCTGAATGGTTAGAAGAACATCGCCAACGAAGAGACTCAGATGGGAAGGAAAGAGAGGAAGACTTCATTGATGTGTTGTTGTCTGCTGTTGACGGGGTTGACCTTGCTGGTTACGATGCCGACACTGTCATTAAAGCGACATGTTTGACATTAATAGCTGCAGGAACGGATACTACGACAGTTACGCTGACTTGGGCATTATCGCTACTGTTGAATAATCGCGACGCCTTGAAGAAAGTTCAAGATGAATTGGATGAGCATGTGGGCATGGAAAAAGTGGTGGATGAATCTGACATAAACAAATTAGTGTACCTTCAAGCTGTAGTTAAAGAGTCAATGAGATTGTACGCAGCTGCACCACTTCCAAGTCCGCGTGAGTTCAACAGCGATTGTACCTTAGGTGGCTACCGTATCGAGGCAGGTACGAGATTGATTTTGAACATTTGGAAGATTCAAAGAGACCCACGTGTGTGGCCAAATCCATTGGAGTTTCAGCCAGAAAGGTTCCTGACAACCCACAAGGGTGTGGATGTGAAGGGTCAGCATTTTGAGCTACTTCCTTTTGGCGGTGGAAGAAGGTCGTGCCCTGGCATATCATTTGCTCTTCAAATGACGCACTTGGCTTTAGCAGCTTTTTTGCAAGCATTTGAAGTCACAACACTGAACAACGAACCAGTTGACATGAGTGCTTTATTTGGACTCACACTCACCAAAGCCACCCCGCTTGAGGTTTTAATCAAACCTCGTTTACCACATCAAGGTTTCCTTAATAATGTATCCTAA 1548 0.4696 MEAAALVVVAVFLLLCYFIKWDTAGSTRKPPEAAGGWPLIGHLRLFSRSGQPVYEALGGLADKYGPIFSIRMGVHQAVVVSSWELARECFTTLDAVVSYRPKYSAAKILTYDYASFAFSPYGDFWRDMHKITVSELFSTRRAELLRGIRDSEVRSSLKELYGTWVEKRGDLLVEMKEWFGNMNLNMILRTVAGKRYCVGNGDEERMRRVRRVLRDFFNLLGVIVIGDAIPFLGWLDLGGEVKEMKKTAVEMDSLISEWLEEHRQRRDSDGKEREEDFIDVLLSAVDGVDLAGYDADTVIKATCLTLIAAGTDTTTVTLTWALSLLLNNRDALKKVQDELDEHVGMEKVVDESDINKLVYLQAVVKESMRLYAAAPLPSPREFNSDCTLGGYRIEAGTRLILNIWKIQRDPRVWPNPLEFQPERFLTTHKGVDVKGQHFELLPFGGGRRSCPGISFALQMTHLALAAFLQAFEVTTLNNEPVDMSALFGLTLTKATPLEVLIKPRLPHQGFLNNVS 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03535 515 PANTHER CYTOCHROME P450 82C3-RELATED 7 508 - -
Viun9g03535 515 Gene3D Cytochrome P450 25 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03535 515 Pfam Cytochrome P450 35 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03535 515 FunFam Cytochrome P450 82C4 21 502 - -
Viun9g03535 515 CDD CYP82 65 504 - -
Viun9g03535 515 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03535 515 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03535 515 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03535 515 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03535 515 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03535 515 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03535 515 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03535 515 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03535 515 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03535 515 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03535 515 SUPERFAMILY Cytochrome P450 36 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03535 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03535 Viun-Chr9 41145953 41147845 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03535 6 511 Cytochrome P450 AT4G31940 49.130 2.75e-180 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03535 - - gmx:100779080 780.015