Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03533 ATGGATTCCTCCTTGCAGTTAACTATTGTAGCCATTTTGGTAGCCATGTTAGTCGTTCTCTGGCATGGAAAGAAGAGAAACAAAGGAGGTAGGAACAATAGCAAAGAAGCTCCTGTCCCGGTCGGTGCATGGCCACTTATCGGTCACCTGCACCTTCTGGGTGGCCACGACCAACTTCTCTACCGAACACTAGGAACAATGGCTGATCAATATGGACCAGCGTTTAACATCTGGCTCGGTACTCGCAGAGCATTTGTTGTTAGCAGCTGGGAAGTGGCTAAAGAATGTTTCACAACCAATGACAAGGCACTTGCCTCACGCCCCACAACCGTTGCCGCAAAGATTATGGGATACAACTACGCAGTGTTTGGTTTTGCCCCTTACAGTCCCTTTTGGCGTGAGATGAGAAAGATTGCGACTCTTGAACTTCTTTCCAACCGCAGGCTCGAAATGCTCAAACATGTGAGAGTGTCGGAACTCAGCATGGGCATAAGGGAGTTATACAACTCTTGGGTCCAAAACAGGTCTCAACCGGTGGCTGTGGAACTGAACCGGTGGTTGGAGGATTTGACTCTGAACATGGTGGTCAGAATGGTGGCAGGGAAACGCTACTTCGGTGCCTCTGCAACGTGTGATGATGATGAAGCAAGGCGGTGCCAGAAGGCTATTAATCAGTTCTTTCATCTCATTGGGATTTTTGTGGTTTCGGATGCGCTCCCGTTTCTGCGTTGGTTTGATGTGCAGGGGCACGAGAGGGCGATGAAGAAAACTGCCATGGAGTTGGATTCCATACTTGAAGGGTGGCTAAAGGAGCATCGTATGCAAAGAGTTGATGGTGAAGTTAAAGCAGAGGGTGAACAGGATTTCATAGATGTCATGTTGTCTCTTCAGAAGAGTGGTCACCTATCAAATTTCCAATATGATTCCGACACCAGCATCAAATCCACGTGTCTCGCTATTATACTTGGTGGCAGTGATACCACAGCAGGAACACTTAGTTGGGCCATCTCATTACTCCTCAACAATCGGCAAGCATTGAAAAAAGCCCAAGAAGAATTGGACCTGAATGTTGGAATGGGTAGGCAAGTTGAGGAGTCAGACATTAAAAACCTTGCATATCTTCAAGCAATTATAAAGGAAACCTTGCGGCTATACCCAGCTGGGCCTCTCCTAGGCCCAAGGGAAGCCCAAGAAGATTGCAATGTGGGGGGTTACCATGTCCCTGCTGGGACACGGTTGGTGGTTAACCTGTGGAAGATTCATAGGGATCCAAGGGTGTGGGAAGAGCCTTCTGCTTTCAGACCAGAGAGGTTTCTGAGAAGTGATGGTGTTGATGTTAAAGGCCAAAACTTTGAACTGATTCCCTTTGGGTCTGGTCGAAGGTCTTGTCCTGGCATGTCTTTTGCACTGCAAGTTCTTCACTTGACCTTGGCTCGTCTGCTTCATGCATTTGAATTTGCAACCCCATCAGATGAAGCTGTTGACATGACGGAGAGTCCCGGTTTAACAATTCCTAAGGCAACTCCTTTGGAGCTTCTTCTCACTCCTCGCCTTCCACCCCAATTATATACCTTCTAA 1578 0.4778 MDSSLQLTIVAILVAMLVVLWHGKKRNKGGRNNSKEAPVPVGAWPLIGHLHLLGGHDQLLYRTLGTMADQYGPAFNIWLGTRRAFVVSSWEVAKECFTTNDKALASRPTTVAAKIMGYNYAVFGFAPYSPFWREMRKIATLELLSNRRLEMLKHVRVSELSMGIRELYNSWVQNRSQPVAVELNRWLEDLTLNMVVRMVAGKRYFGASATCDDDEARRCQKAINQFFHLIGIFVVSDALPFLRWFDVQGHERAMKKTAMELDSILEGWLKEHRMQRVDGEVKAEGEQDFIDVMLSLQKSGHLSNFQYDSDTSIKSTCLAIILGGSDTTAGTLSWAISLLLNNRQALKKAQEELDLNVGMGRQVEESDIKNLAYLQAIIKETLRLYPAGPLLGPREAQEDCNVGGYHVPAGTRLVVNLWKIHRDPRVWEEPSAFRPERFLRSDGVDVKGQNFELIPFGSGRRSCPGMSFALQVLHLTLARLLHAFEFATPSDEAVDMTESPGLTIPKATPLELLLTPRLPPQLYTF 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03533 525 SUPERFAMILY Cytochrome P450 40 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03533 525 CDD CYP82 72 517 - -
Viun9g03533 525 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03533 525 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03533 525 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03533 525 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03533 525 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03533 525 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03533 525 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03533 525 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03533 525 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03533 525 PANTHER CYTOCHROME P450 82C3-RELATED 13 523 - -
Viun9g03533 525 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03533 525 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03533 525 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03533 525 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03533 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Viun9g03533 525 FunFam Cytochrome P450 82C4 27 515 - -
Viun9g03533 525 Gene3D Cytochrome P450 23 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03533 525 Pfam Cytochrome P450 42 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03533 Viun-Chr9 41139352 41141282 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03533 1 524 Cytochrome P450 AT4G31940 65.660 0.0 720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03533 K23136 - gmx:100811993 941.028