Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03525 ATGAGCAACGCCAACTGTAACAAGCCTTCTTCTCCCCAACCTACGATTAAACAACGTAGGCTCACTCGACAGGGGAGACTCCGATACCTCACTGACAAAGACGCTGCTCTGCATTCCACCACTTCTCTACCCGCTTCTCCTCTTCCCTCGTTTAAGTCCGGTTCCGCTTCTGACCATTGGTCTTCCTCTGCGGTTCCGCAACCGCTTCCGCGTCCCGACTCCCCGTTGACTCGTCGATACGATCATCATCAACTCGGATCGCCCCCTTTCGAACATCCTGGCTTCGCCTTTCGCAGAAGGTCGGTGGATCATGATGCTGTGAGAAGTATAAGGTCTACCAGCAATTTGGGTAGACCTTCTTTTGATCCGGCGGCTTCAAATGCCAAACACGATTTAAGAGTGAACATTCCACCTGCAAGAGTGTTGGCAGGCAATACCAGTTCATGTAAAGATCACATAGAACACTCTCAAGATAATGACTCTGAAAATGTTTCCGACTTGAGATTGCATTTTTCGGCCAAGAGTGCCCCCAACAGTATATTCTCCAGCCCTGTTACTAGTCCCCGTAGATCCAGCAATGTAGATTTCTATGATCCTTCCATCATTTTTCATCAAGATTTTAATGACATTTTGAGAGTGTCACCGGCTAAAACTGCTCAGAGTCCAGACCGGACTCCTCTGCGCAGCCCAGGGAGCCTCCTCAATCCAGAGGGATGTCAGAGTCAGCTTCATAAACATAGCTCAAGAGTGTTGCCTGACAATAATCATGTTGATGCACATCCACTGCCTCTTCCTCCTAGAGCGTCACCACCGCCAGCACAGTCATCTCCCCAGCATCAACCAAGTATCGTGCACCTCACCGTAGATAATTCGCCTTCAATGAAAGGTCAATGGCAGAAAGGAAAACTTATAGGGCGGGGATCATATGGATCTGTTTATCACGCAACCAACTTAGAGACTGGAGCCTCGTGTGCAATGAAGGAGGTGGAAATGTTCCCCGATGATCCTAAATCTGCTGACTGCATAAAGCAACTTGAACAGGAAATTAGAATTCTCCGTCAATTACACCATCCCAACATTGTGCAGTACTATGGAAGTGAAGTAGATGGCGATCGACTGTACATATATATGGAGTATGTTCATCCTGGATCACTTGATAAGTTTATGCATGACCATTGTGGAGCTATGACAGAATCTGTAGTTCGCAACTTCACGAGGCATATTCTCTCTGGATTGGCATACTTGCATAGTACCAAGACCATTCACAGGGATATCAAAGGTGCAAACTTGTTGGTTGATGCAACGGGCATGGTTAAACTTGCGGATTTTGGGGTTTCAAAAATTCTGACAGAGAAATCGTATGAACTTTCATTGAAGGGTAGTCCCTACTGGATGGCTCCTGAGCTCATGAAGGCTGCCATAAAGAAAGAATCCAGTCCTGACGTTGCCATGGCCATTGATATATGGAGCTTAGGGTGCACTATCATCGAAATGCTGACAGGAAAACCTCCTTGGAGGGAATATGAAGGGCCGCAAGCCATGTTCAAGGTACTGCACAAATCCCCAAAAATACCTGAAAATTTGTCATCAGATGGACAGGATTTCCTTCAGCAGTGCTTCAGAAGGAATCCGGCAGATCGACCATCGGCAGCACTGCTTCTTACTCATGCTTTTGTACAAAATTTGCACGATCAAGATGCTCTACTTCATTCACAAGGGCAAAACTGTCCCAGAGGAGACCCTGGATCTGGAGATGATTCAAGTAGACATAGCCCCGCTCACAGTTCAAGAAGTAATAACCGTGTAGTGCCAGCCTCCATTGGCGCACGGTTTTTGCATAAAATTCAAAATTTAATAGGTGACACTTCGAAAAAATATGACAGCGAGGAATCTAATCATTCTTCTCGTAACTCTCCCTGCTCCATGACAGAAATAAACAGTCCTCAATCTAGTGCCCTCAATTACATGGCCAATTCCAGCAACATACCCCTCACCACCGTTATGAGAATCATCAGGCACATTTGA 2025 0.4627 MSNANCNKPSSPQPTIKQRRLTRQGRLRYLTDKDAALHSTTSLPASPLPSFKSGSASDHWSSSAVPQPLPRPDSPLTRRYDHHQLGSPPFEHPGFAFRRRSVDHDAVRSIRSTSNLGRPSFDPAASNAKHDLRVNIPPARVLAGNTSSCKDHIEHSQDNDSENVSDLRLHFSAKSAPNSIFSSPVTSPRRSSNVDFYDPSIIFHQDFNDILRVSPAKTAQSPDRTPLRSPGSLLNPEGCQSQLHKHSSRVLPDNNHVDAHPLPLPPRASPPPAQSSPQHQPSIVHLTVDNSPSMKGQWQKGKLIGRGSYGSVYHATNLETGASCAMKEVEMFPDDPKSADCIKQLEQEIRILRQLHHPNIVQYYGSEVDGDRLYIYMEYVHPGSLDKFMHDHCGAMTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDATGMVKLADFGVSKILTEKSYELSLKGSPYWMAPELMKAAIKKESSPDVAMAIDIWSLGCTIIEMLTGKPPWREYEGPQAMFKVLHKSPKIPENLSSDGQDFLQQCFRRNPADRPSAALLLTHAFVQNLHDQDALLHSQGQNCPRGDPGSGDDSSRHSPAHSSRSNNRVVPASIGARFLHKIQNLIGDTSKKYDSEESNHSSRNSPCSMTEINSPQSSALNYMANSSNIPLTTVMRIIRHI 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03525 674 ProSiteProfiles Protein kinase domain profile. 298 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g03525 674 MobiDBLite consensus disorder prediction 1 20 - -
Viun9g03525 674 SUPERFAMILY Protein kinase-like (PK-like) 272 568 IPR011009 -
Viun9g03525 674 Gene3D Transferase(Phosphotransferase) domain 1 295 583 - -
Viun9g03525 674 MobiDBLite consensus disorder prediction 622 646 - -
Viun9g03525 674 Pfam Protein kinase domain 299 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g03525 674 MobiDBLite consensus disorder prediction 214 280 - -
Viun9g03525 674 MobiDBLite consensus disorder prediction 570 603 - -
Viun9g03525 674 ProSitePatterns Protein kinases ATP-binding region signature. 304 327 IPR017441 GO:0005524
Viun9g03525 674 MobiDBLite consensus disorder prediction 1 94 - -
Viun9g03525 674 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 79 585 - -
Viun9g03525 674 MobiDBLite consensus disorder prediction 214 248 - -
Viun9g03525 674 MobiDBLite consensus disorder prediction 35 64 - -
Viun9g03525 674 SMART serkin_6 298 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g03525 674 FunFam Mitogen-activated protein kinase kinase kinase 5 295 598 - -
Viun9g03525 674 MobiDBLite consensus disorder prediction 263 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03525 Viun-Chr9 41084640 41090080 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03525 20 561 MAP Kinase Kinase Kinase AT5G66850 45.363 3.02e-149 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Viun9g03525 Pkinase 2.4e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03525 - - gmx:100781764 1078.93