Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03499 ATGTCTGGTCTGGGTGAACGCCAAACGGTTCCCCTTTCGGTGCTGCTGAAGCGTGAGTTGGCCAACGAGAAAACCGAGAAGCCGGATGTTGTCATCGTGCACGGTCAAGCCAGTGAGAATAAGAAAGGAGAGGATTTCACGCTGTTGAAGACGGAATGCCAGAGGGTGGTGGGAGATGGGGTTTCTACGTATTCTGTTTTTGGGCTATTTGATGGACATAATGGATCTGCTGCCGCTATTTATGCCAAGGAGAATCTTCTGAACAACGTTTTAAGTGCAATTCCTTCTGATCTTAACAGAGATGACTGGGTTTCAGCGTTACCTAGGGCTTTGGTTGCAGGCTTTGTAAAAACTGATAAAGATTTTCAAAGAAAAGCACAAACATCAGGAACAACTGCAACCTTCATGATCATAGATGGATGTGTTGTGACAGTCGCATCAGTTGGTGATTCCCGTTGCATACTTGAACCTCATGAGGGTGGGATGTATTACTTGTCAGCAGACCATAGACTAGATAGCAACGAAGAGGAGAGGATCCGCATCACTTCTAGTGGAGGTGAGGTTGGTCGTCTAAATACTGGGGGAGGCACAGAGGTTGGTCCTTTGAGATGTTGGCCAGGTGGTTTGTGTCTCTCCCGGTCCATTGGTGACAAGGATGTTGGTGAATTTATTGTCCCTGTACCACACGTAAAGCAAGTGAAGCTTTCTACTGTTGGAGGCAGAATCATTATCAGCAGTGATGGTGTCTGGGATGCTCTAACAGCAGAAATGGCCCTTGATTGCTGTCGTGGCATGTCAGCTGAGGTTGCGGCACCACATATTGTGAAAGAAGCCGTGCAAGCAAAGGGACTTAGAGATGACACAACCTGCATTGTTATTGATGTATATCCGCAGGAGAAGCCACCTACTTCTTCGGCAACACAAAAGAAACCGGCAAAAGGAAGGTTCAAGTCCATTTTTCGAAAAAAGTCCTCCGAATCATCATCTTACGTTGACAAACAATACCTTGAGCCAGATGTGGTACAGGAACTATACGAGGAAGGATCTGCTATGCTTTCAGAGAGGTTGGAAACAAAATATCCGCTCTGCAACATGTTCAAGTTGTTTGTCTGCGCAGTGTGTCAGGTAGAGATGAAACCTGGGGAGGGTATTTCCATACACGTGGGTGCGTCTAATCCAGGAAGTTTGCGTCCCTGGGATGGACCTTTCCTTTGTTCAAGTTGCCAGGAGAAGAGAGAAGCCATGGAAGGAAAGCGAACATCAGACTTAGCAGCGGAAGTGACTAATGAATTATCATGTAATTTGCATATTGAGAAACAAAGATTGTTCCTGTAA 1335 0.4607 MSGLGERQTVPLSVLLKRELANEKTEKPDVVIVHGQASENKKGEDFTLLKTECQRVVGDGVSTYSVFGLFDGHNGSAAAIYAKENLLNNVLSAIPSDLNRDDWVSALPRALVAGFVKTDKDFQRKAQTSGTTATFMIIDGCVVTVASVGDSRCILEPHEGGMYYLSADHRLDSNEEERIRITSSGGEVGRLNTGGGTEVGPLRCWPGGLCLSRSIGDKDVGEFIVPVPHVKQVKLSTVGGRIIISSDGVWDALTAEMALDCCRGMSAEVAAPHIVKEAVQAKGLRDDTTCIVIDVYPQEKPPTSSATQKKPAKGRFKSIFRKKSSESSSYVDKQYLEPDVVQELYEEGSAMLSERLETKYPLCNMFKLFVCAVCQVEMKPGEGISIHVGASNPGSLRPWDGPFLCSSCQEKREAMEGKRTSDLAAEVTNELSCNLHIEKQRLFL 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03499 444 ProSiteProfiles PPM-type phosphatase domain profile. 29 295 IPR001932 -
Viun9g03499 444 FunFam probable protein phosphatase 2C 12 34 301 - -
Viun9g03499 444 SUPERFAMILY PP2C-like 40 295 IPR036457 -
Viun9g03499 444 CDD PP2Cc 40 295 IPR001932 -
Viun9g03499 444 PANTHER PROTEIN PHOSPHATASE 34 294 IPR015655 GO:0004722|GO:0006470
Viun9g03499 444 Gene3D - 21 304 IPR036457 -
Viun9g03499 444 Pfam Protein phosphatase 2C 59 279 IPR001932 -
Viun9g03499 444 SMART PP2C_4 23 293 IPR001932 -
Viun9g03499 444 SMART PP2C_SIG_2 48 295 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03499 Viun-Chr9 40957417 40962683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03499 1 421 PP2C-type Phosphatase Gene Family AT1G47380 76.010 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03499 - - vun:114164254 865.914