Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03455 ATGATGTGCAAGAGTTCCATGAAGACAATGGATGGTCCTGTAGTGCAGAGGGTTTCAAAATGCTTTGTGAAAGCAAGCCATTCCACCCAAGAATCAAATCAAATCTGTCACCTAACACCTTGGGATCTTGCCATGTTGTCTGCACACTATATCCAAAAGGGTCTTCTCTACAAGAAACCTGAAACCCTTGTTGATGAACATGATTTCATAGGAAATCTGTTGGAGAAGCTCAAACACTCTCTTTCTCTCACCCTCTCCCATTTTTATCCATTGTGTGGTCGCCTTGTCACCCACAAAACCAAAGACCCTCCCTTCTATGCTGTTTCCATCGATTGCACAACCAATTCTGGAGTTAGATTCATCCATGCAACTTTAGATATGACCATATCTGATATCCTATCTCCCGTTGATGTCCCACCCATTGTTCAATCATTGTTCGATCACGATAGAGCACTCAACCACGATGGTCACACCATGCCGCTGTTGTCCATCCAAGTCACCGAGCTAGTGGATGGTGTTTTCATAGGTTGTTCCATGAACCACTCTCTCGGTGATGGCACTGCTTACTGGAATTTCTTCAACACGTGGTCTGAGATCTTTCGAGCTCAAGCTCAAGGCCATGAACATGATGTTCCCATATCGCACCCTCCCATTCACAACCGCTGGTTTCCGAATGGTTGCGTTCCACCAATCAATCTTCCATTCAACCACCACGACGAGTTTATCAGCAGGTACGAAGCACCCATGATGAGAGAGAGAATATTCCACTTCTCAGCCGAGTCTATCGCAAAACTGAAAGCAAAAGCCAACTCGGAATGCAATACTACAAAAATATCTTCGTTCCAATCACTGTCAGCACTTGTTTGGAGATGCATAACGCGGGCGCGGCGCTTGGCGCGTGATCAGAAAACAAGTTGCAAGTTATCGACGAACAACCGTACAAGAATGGATCCACCACTGGCTCAGGAGTACTTTGGGAACTCGATTCATACACTGAATGCAGGAACAGCCACTTCAGGGGAATTGCTTGAGAACGGTCTGGGTTGGGCAGCATGGAAGTTGCACATGGCTGTTATAAACCATAACGACAGAGTGGTGTTGGGATGGGTGAGAGAGTGGTTAAAATCTCCTCTGATATATCAACTTGGTCGTTATTTTGACCCCTACTGTGTGATGATGGGAAGCTCACCCAGATTCAACATGTATGGAAATGAATTTGGAATGGGAAAAGCAATAGCAGTTAGAAGTGGGTATGCTAACAAATTTGATGGAAAAGTTACTTCATATCCAGGCCATGAAGGAGGAGGAAGTGTTGATTTAGAAGTATGTCTTTCGCCAGGTGTAATGGCTGCGCTGGAATCCGACCAGGAGTTCATGGATTCAGTTTCAGTTTCCAATGTTCTCTAG 1407 0.452 MMCKSSMKTMDGPVVQRVSKCFVKASHSTQESNQICHLTPWDLAMLSAHYIQKGLLYKKPETLVDEHDFIGNLLEKLKHSLSLTLSHFYPLCGRLVTHKTKDPPFYAVSIDCTTNSGVRFIHATLDMTISDILSPVDVPPIVQSLFDHDRALNHDGHTMPLLSIQVTELVDGVFIGCSMNHSLGDGTAYWNFFNTWSEIFRAQAQGHEHDVPISHPPIHNRWFPNGCVPPINLPFNHHDEFISRYEAPMMRERIFHFSAESIAKLKAKANSECNTTKISSFQSLSALVWRCITRARRLARDQKTSCKLSTNNRTRMDPPLAQEYFGNSIHTLNAGTATSGELLENGLGWAAWKLHMAVINHNDRVVLGWVREWLKSPLIYQLGRYFDPYCVMMGSSPRFNMYGNEFGMGKAIAVRSGYANKFDGKVTSYPGHEGGGSVDLEVCLSPGVMAALESDQEFMDSVSVSNVL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03455 468 Gene3D - 240 455 IPR023213 -
Viun9g03455 468 FunFam Tryptamine hydroxycinnamoyl transferase 236 456 - -
Viun9g03455 468 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 18 459 - -
Viun9g03455 468 Gene3D - 17 227 IPR023213 -
Viun9g03455 468 Pfam Transferase family 17 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03455 Viun-Chr9 40755639 40757148 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03455 75 453 Monolignol Biosynthesis Gene Families AT5G48930 28.250 1.01e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03455 - - gmx:100787228 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03455 9 40755639 40757148 Viun9g03455 9 40755639 40757148 ECH