Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03453 ATGAATTCCACCGTCGTAAGAAACGTTTCAGAATGTTTCATCAAGCCGTTTGGCCCAGCCCAAGATTCAAACCGAATATGCAATTTAACACCTTGGGATATTGCTATGCTGTCCATGCACTACATCCAGAAGGGTCTACTCTTCAAGAAACCTGCAACACTTGTTCATCGACAAGATTTCATAGAGAATCTGTTGGAGAAGCTCAAGCACTCTCTTTCTCTCACCCTCTTCCATTTTTATCCATTGGCCGGCCACCTTGTCACAAACAAAGACCCTTCCTCTTATACTATTTTCGTCGATTGCAACAACAGTGATGGAGCTAGATTTATCTATGCAACTTCGGATTTGACAATATTTGACATACTCTCCCCTGTTTACGTCCCGGTCGTTGTTCACTCGTTCTTTGATCATCACAAAGCTGTCAACCATGATGGTCACACCATGCCTCTGCTGTCCGTTAAAGTCACTGAACTATTGGATGGTGTTTTCATAGGCTGTTCAATGAACCACGCCATAGGCGATGGAACTTCTTATTGGAATTTCTTTAATACATGGTCTGAGATCTTTCATGCTCAAGCTCAAGGCCATGAATACCGTGTTCCCATTTCACGCCACCCCATTCATAACCGGTGGTTTCCTGATGGCTGTGATCCATTAATCAATCTTCCCTTCAAACATCAAGACGAGTTTATTAGCAGATTTGAAGCACCCGAGCTGCAAGAGAGAATCTTCCATTTTTCAGCAGAGTCAATTGCGAAACTGAAAGCCAGGGCTAACTCAGAGTCCAAGACCACCAAAATCTCTTCGTTCCAATCGTTATCAGCTCATGTATGGAGATGCATAACACGCGCTCGTCGACTGCCACGTGATGAGACAACAAGCTGCAGATTGGCCGTAAATAACCGAGCAAGAATGGAGCCGCCTCTGCCATATGAATACTTTGGAAACTGTATTAATGTGGTGAGTGCGGGGACAACAGTAGGGGAATTGCTGGAGAACGATTTAGGATGGGCTGCATGGAAGGTGCGCATGGCTGTTGCAAACCAAAAGGACGGAGCAGTGCGAGACGCGGTGAAAGAGTGGTTACAACGCCCTGTGGTGTACCAACTTGGTGTGCACTTTGATTCCTGCAGTGTGACGATGTCAAGTTCTCCCAGGTTCGACATGTATGGGAATGAATTTGGGATGGGAAAAGCTGTTGCTGTTCTCAGCGGATATGCCAACAAATTTGAAGGGAATGTGACTTCATATCCTGGATCTGAAGGAGGGGGAAGCATAGATTTGGAAGTGTCTCTTTCGCCCGATGCAATGACCTTACTAGAATCGGATGAGGAGTTTATGGAAGCTGTTTCTGTGGCCAATTTCCTACACTAG 1374 0.4549 MNSTVVRNVSECFIKPFGPAQDSNRICNLTPWDIAMLSMHYIQKGLLFKKPATLVHRQDFIENLLEKLKHSLSLTLFHFYPLAGHLVTNKDPSSYTIFVDCNNSDGARFIYATSDLTIFDILSPVYVPVVVHSFFDHHKAVNHDGHTMPLLSVKVTELLDGVFIGCSMNHAIGDGTSYWNFFNTWSEIFHAQAQGHEYRVPISRHPIHNRWFPDGCDPLINLPFKHQDEFISRFEAPELQERIFHFSAESIAKLKARANSESKTTKISSFQSLSAHVWRCITRARRLPRDETTSCRLAVNNRARMEPPLPYEYFGNCINVVSAGTTVGELLENDLGWAAWKVRMAVANQKDGAVRDAVKEWLQRPVVYQLGVHFDSCSVTMSSSPRFDMYGNEFGMGKAVAVLSGYANKFEGNVTSYPGSEGGGSIDLEVSLSPDAMTLLESDEEFMEAVSVANFLH 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03453 457 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 448 - -
Viun9g03453 457 Gene3D - 2 222 IPR023213 -
Viun9g03453 457 Pfam Transferase family 13 447 - -
Viun9g03453 457 FunFam Tryptamine hydroxycinnamoyl transferase 225 443 - -
Viun9g03453 457 Gene3D - 226 442 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03453 Viun-Chr9 40742373 40744364 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03453 48 441 Monolignol Biosynthesis Gene Families AT5G48930 27.885 2.44e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03453 - - vum:124831304 870.152