Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03452 ATGATGAATTCCCCCGTAGTTCGAATCGTTTCAGAATGTTTTGTCAAGCCGTCGGGCCAAGCTCAAGAATCAGACCGAATCTGCAATTTAACACCTTGGGATATTGCTATGCTGTCTTTGCACTACATCCAGAAGGGTCTACTCTTCCAGAAGCCAAAAACACTTGTTGATCAGCATCATTTCATAGAGAATCTGTTGGAGAAACTCAAACATTCTCTTTCTCTAACCCTCTTCCATTTCTATCCATTGTCCGGTCGCCTTGTCACCCACAAAACCGAAGACCCATCATCTTATACTATTTTTGTTGATTGCAGCAACGGCAGAGGAGCTAAATTCATCCATGCAACTTTGGATATGACAATATCCGACATCCTCTCCCCCGTTGATCTCCCTCCGATTGTGAACTCATTCTTTGACCTCCACAAAGCAGTCAACCACGACGGTCATACCATGCCACTGTTGTCGATTAAAGTTACTGAACTAGTGGACGGTGTTTTCATAGGTTGTTCCATGAACCACAATCTCGCTGATGGCACTTCTTATTGGAATTTCTTCAATGCATGGTCTGAGATCTTTCAAGCTCAAGCTGAGGGAAATGAACACGATGTTCCCATTCCCATGGTCATTTCGTGTCATCCTATTCATAACCGGTGGTTTCCGGATGGTTGCGGCCCGTTAATCAACCTTCCCTTCAAACATCACGACGAGTTTATTAAAAGATTTGAGGCACCTTTGCTGAGAGGGAGAATCTTCCACTTTTCAGCAGAGTCTATTGCAAAACTGAAAGCAAGGGCGAACGCAGAGTCCAAAACCACAAAAATCTCTTCGCTCCAATCCTTATCAGCGCATGTTTGGAGATGCGTAACACGCGCACGCCAGACGCCAGACGATGAGAGAACGAGTTGCAAACTGGCCATAAACAACCGGTCAAGAATGGAACCGCCTCTGCCGGCCGAGTACTTTGGAAGCGCTGTTGGTGTGGTGAGCGCAGAGAGCACGGTAGGGGAATTGCTGGGGAATGATCTAGGATGGGCTGCGTGGAAGGTGCACGTGGCTGTTGGCGGCCATAACGACAGAGTGGTGAGAGACATGGTGAAAGAGTGGTTGCAGCATCCAGTGATTTACCAACATGGTGTGATCGTTGACAACAGTTGTGTGATGATATCAAGTTCTCCCAGGTTCAACGTGTATGGAAATGAATTCGGAATGGGAAAAGCGGTGGCAGTTCTGAGTGGATATGCCAACAAGTTTGACGGGGACGTGATCGCACATCCAGGACGTGAAGGAGGAGGAAGCATAGATTTTGAAGTCTCTCTTTCACCTGATGTAATGAGTGCACTGGAATCAGATCAGGAGTTCATGGAAGCTGTTTCCGTGCCCAATCTTCTGCACTACCCACTTTCTTGA 1407 0.4691 MMNSPVVRIVSECFVKPSGQAQESDRICNLTPWDIAMLSLHYIQKGLLFQKPKTLVDQHHFIENLLEKLKHSLSLTLFHFYPLSGRLVTHKTEDPSSYTIFVDCSNGRGAKFIHATLDMTISDILSPVDLPPIVNSFFDLHKAVNHDGHTMPLLSIKVTELVDGVFIGCSMNHNLADGTSYWNFFNAWSEIFQAQAEGNEHDVPIPMVISCHPIHNRWFPDGCGPLINLPFKHHDEFIKRFEAPLLRGRIFHFSAESIAKLKARANAESKTTKISSLQSLSAHVWRCVTRARQTPDDERTSCKLAINNRSRMEPPLPAEYFGSAVGVVSAESTVGELLGNDLGWAAWKVHVAVGGHNDRVVRDMVKEWLQHPVIYQHGVIVDNSCVMISSSPRFNVYGNEFGMGKAVAVLSGYANKFDGDVIAHPGREGGGSIDFEVSLSPDVMSALESDQEFMEAVSVPNLLHYPLS 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03452 468 Pfam Transferase family 7 454 - -
Viun9g03452 468 FunFam Tryptamine hydroxycinnamoyl transferase 233 451 - -
Viun9g03452 468 Gene3D - 6 223 IPR023213 -
Viun9g03452 468 Gene3D - 238 450 IPR023213 -
Viun9g03452 468 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03452 Viun-Chr9 40739192 40740917 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03452 67 448 Monolignol Biosynthesis Gene Families AT5G48930 27.820 3.09e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03452 - - vum:124831304 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03452 9 40739192 40740917 Viun9g03452 9 40739192 40740917 ECH