Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03450 ATGGGTACTCCGGCGGTACGACGCATTTCAGAATGTTTTGTGAAGCCTCACCCCTCCGACCACTTCTCCGATCAAATCTGCAATTTAACACCTTGGGATATTGCCATGTTGTCTGTGCACTATATTCAGAAGGGTCTACTCTTCAAGAAGCCTGAAACACTTGTTGATGAAAACGAGTTCATACAAAATCTGTTGGAGAAGCTCAAACACTCTCTTTCTCTTACCCTCTCTCATTTCTATCCATTGTCTGGTCGCCTCGTTACCCACAAAACCCAAAACCCTCCCTCTTATACTGTTTCTGTCGATTGCAAGAACAGTGATGGAGCTAGATTCATTTATGCAACTCTTGATGTCACCATATCTGAACTACTCTCCCCAGTAGACACCCCATCCATTTTTCAATCATTCTTTGACCACCACAAAGCAATCAACCATGACGGTCACTCCATGCCGCTCTTGTCCATCCAAATCACTGAATTGGTCGATGGTGTTTTCATAGGCTGTTCCATGAACCATGTTATTGGCGATGGAACTTCTTATTGGAATTTCTTCAATTCATGGTCTCAGATCTTCCAAGCACAGTCTCTCTCACGCCAACCCATTAACAATCGTTGGTTTCCAAATAATTGTATACCACCGATATCTCTTAATTTCAAACATCATGACGAGTTTATAGAGAGATCTGAAAAACCCCTCCTGAGAGAGAGATTTTTTCATTTTTCAGCAGAGTCTATTGCGAAACTGAAAGCAAAGGCCAACTCAGAATCCAATACCACAACAATCTCTTCCTTCCAGTCATTATCAGCACTTGTTTGGAGATCGATAACTCGTGCGCGCTCCATACCGTCTGACCAAAAAACAACTTGCAGATTAGCCGCAACCAGTCGATCAAGAATGGAGCCGGCTCTGCCTGAAGAATACTTTGGAAACTGCCTTCATGCAGTGAATGCAGAAACGACAGCAGGGGAATTGCTTGAGAATGATCTAGGATGGGCAGCGTGGAAGTTGCATGTGGCTGTTAAAAACCTTAACGATAGAGTGGTGTTGCAGTATCTGCAAGAGTGGTTAGATTCTCCTGTGATATATCAAATGGGTCGTTTCTTTGAACCGTATTGTGTGATGATGGGTAGCTCCCCCAGGTTCAATATGTATGGGAGTGAATTTGGAATGGGGAAAGCGGTGGCTGCTAGAAGCGGCTATGCAAATAAATTTGATGGGAAAGTGTCATCATACCCAGGGCGTGAAGGAGGAGGAAGCATTGATTTGGAAGTTTGCCTTTTCCCACATACAATGACTGCCTTGGAATCAGACAAGGAATTCATGAATGCAGTTTCTGAGTTCAATCCCCTGCTGTTCTAG 1359 0.4378 MGTPAVRRISECFVKPHPSDHFSDQICNLTPWDIAMLSVHYIQKGLLFKKPETLVDENEFIQNLLEKLKHSLSLTLSHFYPLSGRLVTHKTQNPPSYTVSVDCKNSDGARFIYATLDVTISELLSPVDTPSIFQSFFDHHKAINHDGHSMPLLSIQITELVDGVFIGCSMNHVIGDGTSYWNFFNSWSQIFQAQSLSRQPINNRWFPNNCIPPISLNFKHHDEFIERSEKPLLRERFFHFSAESIAKLKAKANSESNTTTISSFQSLSALVWRSITRARSIPSDQKTTCRLAATSRSRMEPALPEEYFGNCLHAVNAETTAGELLENDLGWAAWKLHVAVKNLNDRVVLQYLQEWLDSPVIYQMGRFFEPYCVMMGSSPRFNMYGSEFGMGKAVAARSGYANKFDGKVSSYPGREGGGSIDLEVCLFPHTMTALESDKEFMNAVSEFNPLLF 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03450 452 Gene3D - 218 436 IPR023213 -
Viun9g03450 452 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 442 - -
Viun9g03450 452 Gene3D - 8 217 IPR023213 -
Viun9g03450 452 FunFam Tryptamine hydroxycinnamoyl transferase 219 438 - -
Viun9g03450 452 Pfam Transferase family 18 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03450 Viun-Chr9 40729326 40730859 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03450 66 435 Monolignol Biosynthesis Gene Families AT5G48930 27.778 1.49e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03450 - - vra:106761257 758.829