Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03449 ATGAGTACCCCCGCCGTTCGACGCATTTCAGAATGCTTTGTGAAGCCTCAACTCTGCAACCAAATCTGCAATTTAACTCCTTGGGATATTATTATGCTTTCTACAAACTATATCCAGAAGGGTCTTCTCTTCAAGAAACCTGCAAACCTTGTTCATGATCATGATTTCATACAAAATCTGTTGGACAACCTCAAACACTCTCTTTCTCTTACCCTCTCCCATTTTTATCCATTGTCTGGTCGTTTTGTCACTCACAAAACCCAAAACCCTCCCTCTTGTACTGTTTCTGTTGATTGCAAGAACAGTGATGGAGCTAGATTCATTCATGCAACTCTGGATATGACTATAGCTGATATCCTCTCCCCCGTTGACGTCCCACCCATTGTTCAATCATTCTTTGACCACCACAAAGCAGTCAACCATGACGGTCACTCCATGCCGCTCTTGTCCATCCAAGTCACTGAATTGGTCGATGGTGTTTTCATAGGTTGTTCAATGAATCACTCTGTCGGTGATGGCACTGCGTATTGGAATTTCTTCAATACATGGTCTCAGATCTTTCAAGCACAATCCGAAGCTGAAAACCATGAATACGATGTTCCCATCTCACGCCAACCCATTCACAATCGCTGGTTTCCACATAATTGTAGTCCACCAATCTCTCTTCCTTTCAAACATCATGAGGAGTTTATTTGGAGATCTGAAACGCCCCTGCTGAGAGAGAGATTTTTCCACTTTTCAGCAGAGTCTATCGCGAAACTGAAAGCAAAGGCCAACTCAGAATCCAATACCACAACAATCTCTTCATTCCAGTCACTATCAGCACTTGTTTGGAGATCGATAACTCGTGCGCGCTCCCCACCGTCTGAGCAGAAAACAACTTGCAGATTAGCCGCCAACAATCGACCAAGAATGAAGCCGCCTGTGGTAGAAGAATACTTTGGAAACTGCGTTCATGCAGTGAGTGCAGAAACGACAACAGGGGAATTGCTTGAGAATGGTATAGGATGGGCAGCAGGGAAGTTGCATGTGGCTGTTGCAGAGCTTACCGATAGAGTGGTGGTAGAATTTCTGGAAGGGTGGTTAGGTTCTCCTTTCATAATTCAAATGGGTCGTTACTTTGACCCGTACAGCTTGATGATGGGTAGTTCGCCCAGGTTCAACATGTATGGGTGTGAATTCGGAATGGGGAAAGCGGTGGCTGCTAGAAGTGGCTACGCAAACAAATTTGATGGGAAGGTGTCGGCATACCCAGGGCGTGAAGGAGGAGGAAGCATTGATTTGGAAGTTTGCCTTCTGCCACACATAATGAGTGCTTTGGAATCAGACCAGGAGTTCATCAGTGCTGTTACTGTGTTTGATCCCCTGCTGTCCTAG 1377 0.4539 MSTPAVRRISECFVKPQLCNQICNLTPWDIIMLSTNYIQKGLLFKKPANLVHDHDFIQNLLDNLKHSLSLTLSHFYPLSGRFVTHKTQNPPSCTVSVDCKNSDGARFIHATLDMTIADILSPVDVPPIVQSFFDHHKAVNHDGHSMPLLSIQVTELVDGVFIGCSMNHSVGDGTAYWNFFNTWSQIFQAQSEAENHEYDVPISRQPIHNRWFPHNCSPPISLPFKHHEEFIWRSETPLLRERFFHFSAESIAKLKAKANSESNTTTISSFQSLSALVWRSITRARSPPSEQKTTCRLAANNRPRMKPPVVEEYFGNCVHAVSAETTTGELLENGIGWAAGKLHVAVAELTDRVVVEFLEGWLGSPFIIQMGRYFDPYSLMMGSSPRFNMYGCEFGMGKAVAARSGYANKFDGKVSAYPGREGGGSIDLEVCLLPHIMSALESDQEFISAVTVFDPLLS 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03449 458 FunFam Tryptamine hydroxycinnamoyl transferase 225 444 - -
Viun9g03449 458 Pfam Transferase family 20 446 - -
Viun9g03449 458 Gene3D - 227 443 IPR023213 -
Viun9g03449 458 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 447 - -
Viun9g03449 458 Gene3D - 8 218 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03449 Viun-Chr9 40726175 40727775 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03449 12 441 Monolignol Biosynthesis Gene Families AT5G48930 24.891 2.66e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03449 - - vra:106761257 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03449 9 40726175 40727775 Viun9g03449 9 40726175 40727775 ECH