Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03448 ATGGTTACTCCTGTCGTTCGACGCATTTCAGAATGCTTCGTCAAACCAAATGATTTAACCCAAGTTTCAAACCAAATATGCAATTTAACACCTTGGGATATTTCTATGTTGTCTGTGCACTATATTCAGAAGGGTCTACTCTTCAAGAAGCCTGCAACCCTTGTTGATGAACACGATTTCATACAAAATCTGTTGGAGAAGCTCAAACACTCTCTTTCTCTCACCCTCTCTCATTTCTATCCATTGTCTGGTCGCCTTGTTACCCACAAAACCCAAAACCCTCCCTCTTATACTGTTTCTGTCGATTGCAAGAACAGTGATGGAGCTAGATTCATTTATGCAACTCTTGATGTCACCATATCTGAACTACTCTCCCCAGTAGACACCCCACCCATTTTTCACTCATTCTTTGACCACCACAAAGCAGTCAACCATGACGGTCACACCATGCCGCTCTTGTCCATCCAAGTCACTGAATTGGTCGATGGTGTTTTCATAGGTGGTTCCATGAATCACTCTGTGGGTGATGGCACATCGTATTGGAACTTCTTCAATACATGGTCTGAGATCTTTGAAGCACAATCTCAAGGCCAAGAATATGATGTTCCAATTTTGCGCCAACCTATTCACAACCGCTGGTTTCCAAATGATTGCAGTCCACCGATCAATCTTCCTTTCAAACATCACGACGAGTTTATCAGCAGGTATGAAGCGCCCTTGGTGAGAGAGAGAATCTTCCACTTTTCGGCAGAGTCTATAGGAAAACTGAAAGCAAGGGCAAACTCAGAGTCCAACAGTGAAACCACGAAAATCTCTTCGTTCCAGTCATTATCAGCACTTGTTTGGAGATCCATAATTCGAGCATGCTCCCTAGCATATGAGCAAAAAACACGTTTCAACTTAACTGCAAACAATCGGGGAAGAATGGAGCCGCCTCTGGCTGATGAATACTTTGGAAACTCGGTTGATAAGTTGAGTGCGGAAACGACAGTGGGGGAGTTACTTGAGAATGATCTAGGATGGGCTGCAGAGAAGTTGAACCATGCTGTTACAAGGCACAACGACAGAAAGGTGTTGCAATTAGTCCAGGAGTGGTTACAGTGTCCGGTGATCAAGAAAACTAGTCAGCCTTTGGAGCCGTACGTTGTGCTGATAAGTAGCTCACCAAGGTTCAACATGTATGGGAGTGAGTTTGGAATGGGGAAAGCAGTGGCAGTGAGAAGTGGATATGCCAACAAATTTGATGGGAAAGTGACATCATTTCCAGGTCGTGAAGGAGGGGGAAGCATCGACTTAGAAATCTGCCTTTTACCGCATATAATGACCTCTCTTGAGTCAGACATGGAGTTTATGAATGCAGTTTCGGTTTCCAATTCCTTATGCTAG 1386 0.4408 MVTPVVRRISECFVKPNDLTQVSNQICNLTPWDISMLSVHYIQKGLLFKKPATLVDEHDFIQNLLEKLKHSLSLTLSHFYPLSGRLVTHKTQNPPSYTVSVDCKNSDGARFIYATLDVTISELLSPVDTPPIFHSFFDHHKAVNHDGHTMPLLSIQVTELVDGVFIGGSMNHSVGDGTSYWNFFNTWSEIFEAQSQGQEYDVPILRQPIHNRWFPNDCSPPINLPFKHHDEFISRYEAPLVRERIFHFSAESIGKLKARANSESNSETTKISSFQSLSALVWRSIIRACSLAYEQKTRFNLTANNRGRMEPPLADEYFGNSVDKLSAETTVGELLENDLGWAAEKLNHAVTRHNDRKVLQLVQEWLQCPVIKKTSQPLEPYVVLISSSPRFNMYGSEFGMGKAVAVRSGYANKFDGKVTSFPGREGGGSIDLEICLLPHIMTSLESDMEFMNAVSVSNSLC 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03448 461 Gene3D - 8 222 IPR023213 -
Viun9g03448 461 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 452 - -
Viun9g03448 461 Gene3D - 233 447 IPR023213 -
Viun9g03448 461 Pfam Transferase family 9 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03448 Viun-Chr9 40723947 40725646 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03448 66 436 Monolignol Biosynthesis Gene Families AT5G48930 25.945 7.97e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03448 - - gmx:100795679 754.592