Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03447 ATGATCACCCCTGTGGTTCGACGCATTTCAGAATACTTGGTGAAACCACGTGGTTTAACCCAAGTCTCAAACCAAACATGCAATTTAACATCCTGGGATATTGCTATGTTGTCTATGCACTATATCCAGAAAGGTCTGCTATTCAAGAAGCCTGCAACCCTACTTGATGAACATGCTTTCATACAAAATCTGTTGGAGAACCTCAAACACTCTCTTTCTCTTACCCTCTTCCATTTTTATCCATTGTCTGGTCGCCTTGTCACCCACAAAACCCAAAACCCTCCCACTTATACTGTTTCTGTTGATTGTAACAACAGCGATGGAGCTAGATTCATTTATGCAACTCTTGATATGACCATAGCTGATATCCTCTCCCCCATTGATGTCCCACACATTGTTCAATCACTCTTTGACCACCACAAAGCAGTTAACCATGACGGTCACTCCATGCCGCTCTTGTCCATCCAGGTCACTGAACTAGTCGACGGTGTTTTCGTAGGTTGTTCCATGAATCACGCTGTCTGTGATGGCACTTCTTATTGGAATTTCATCAATACATGGTCTCAGATATTCCAAGCTCAACCCCAAGCCGATGAATATGACGTTCCCATTCTGCACCAACCTATTCACAACCGCTGGTTTCCAAGTGATTGCACTCCACCAATCAATCTTCCTTTCAAACATCATAACGAGTTCATCAGCAGGTTTGAAGCACCCTTGCTGAGAGAGAGATTCTTCCACTTTTCAGCAGAGTCTATAGCAAAACTGAAAGCAAGGGCAAACTCAGAGTCCAACGATAGTAATACCTCCAAAATCTCTTCATTCCAGTCATTATCAGCACTGGTGTGGAGATCAATAACTCGTGCATGCTCTCTACCGTATGAACAAAAAACAAGATGTAGGTTAGCTGCAAACAATAGATCAAGAATGGAACCGCCTCTTCCACACGAATACTTTGGAAACTCAATTCATAAGGTGAGTGCAGAAACGAGAGTTGGGGAATTACTTGAGAATGATCTTGGATGGGCTGCATTGAAGTTGCACTCTGCTGTTACAAGGCACAATGACAGAGAGGTGTTGCAATCAGTCCAAGAGTGGTTACAGTCTCCGGTGATCTACCAACTTGGTCAGCCCATGGAGGCGTTCGTTGTGATGATTAGTAGCTCGCCCAGGTTCAACATGTATGGGAATGAGTTTGGAATGGAGAAAGCAGTGGCAGTTAGAAGTGGGTATGCCAATAAATTTCATGGGAAGGTGATATCATATCCAGGACGTGAAGGAGGGGGAAGCATCGATTTGGAACTCTGCCTTTTGCCACATGCAATGTGCTCTCTCGAATCAGATGAGGAGTTTATGAATTCTGTTTCAATTTCCACTACCTTATACTAG 1389 0.437 MITPVVRRISEYLVKPRGLTQVSNQTCNLTSWDIAMLSMHYIQKGLLFKKPATLLDEHAFIQNLLENLKHSLSLTLFHFYPLSGRLVTHKTQNPPTYTVSVDCNNSDGARFIYATLDMTIADILSPIDVPHIVQSLFDHHKAVNHDGHSMPLLSIQVTELVDGVFVGCSMNHAVCDGTSYWNFINTWSQIFQAQPQADEYDVPILHQPIHNRWFPSDCTPPINLPFKHHNEFISRFEAPLLRERFFHFSAESIAKLKARANSESNDSNTSKISSFQSLSALVWRSITRACSLPYEQKTRCRLAANNRSRMEPPLPHEYFGNSIHKVSAETRVGELLENDLGWAALKLHSAVTRHNDREVLQSVQEWLQSPVIYQLGQPMEAFVVMISSSPRFNMYGNEFGMEKAVAVRSGYANKFHGKVISYPGREGGGSIDLELCLLPHAMCSLESDEEFMNSVSISTTLY 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03447 462 Gene3D - 230 447 IPR023213 -
Viun9g03447 462 Gene3D - 8 222 IPR023213 -
Viun9g03447 462 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 453 - -
Viun9g03447 462 Pfam Transferase family 8 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03447 Viun-Chr9 40715099 40716672 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03447 68 437 Monolignol Biosynthesis Gene Families AT5G48930 28.278 1.01e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03447 - - gmx:100795679 769.229