Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03446 ATGACCACCAGCATGAAGGTGCATCACTTCACACGTGCATTCTGGGAGCACGAACCCTTCCTCACGCTTGGCTGCAAGCGATTACGCCCTCTTGCTCCCAAGCTTCCCAACCCTTCTCTTCCTTTCGATCTCAAGACCTTCATCAGACCAGAAACTGGTCCCACAAAACCCGTTTCCTCTCTCCACAATAACAAGGATCCACCTTCACCCCAGGCCCAGGTCGAAACGCATCCAGGAGGGACGCGGTGGAATCCGACGCAAGAACAGATTGGTATATTGGAGATGCTGTACAAAGGTGGGACGAGAACCCCAAATGCTCAGCAGATAGAGCAGATCACTGTTCAGTTAGGAAAGTACGGAAAGATCGAAGGGAAGAATGTGTTCTATTGGTTTCAGAATCACAAAGCACGCGAGAGACAAAAGCAGAAGCGTAACAGCCTTGCCTTTTCTCATACGCCTCGAACTCCCACAATTCATACTGTTGTTACTTTAGAGGCAGCAAAGGGGGAAGTAGTAGATAGAGAGGAGGAGGAAGGTAGTCCCTACAAAAAGAAGTGTAGGAGATGGGTATTTGATTGTTTGGAAGAGCAAAGCATGTCGTCATCGTCGGTGTGTGAAGAGGAGGAATTCAGAACTCTGGAGCTTTTCCCATTGCACCCGGAAGGAAGATGTGAAGGGGTTTGA 684 0.4912 MTTSMKVHHFTRAFWEHEPFLTLGCKRLRPLAPKLPNPSLPFDLKTFIRPETGPTKPVSSLHNNKDPPSPQAQVETHPGGTRWNPTQEQIGILEMLYKGGTRTPNAQQIEQITVQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLAFSHTPRTPTIHTVVTLEAAKGEVVDREEEEGSPYKKKCRRWVFDCLEEQSMSSSSVCEEEEFRTLELFPLHPEGRCEGV 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03446 227 PANTHER WUSCHEL-RELATED HOMEOBOX 4 5 223 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Viun9g03446 227 ProSiteProfiles 'Homeobox' domain profile. 76 141 IPR001356 GO:0003677
Viun9g03446 227 Pfam Homeodomain 81 140 IPR001356 GO:0003677
Viun9g03446 227 CDD homeodomain 81 142 IPR001356 GO:0003677
Viun9g03446 227 Gene3D - 81 146 - -
Viun9g03446 227 MobiDBLite consensus disorder prediction 56 84 - -
Viun9g03446 227 MobiDBLite consensus disorder prediction 45 84 - -
Viun9g03446 227 SMART HOX_1 78 145 IPR001356 GO:0003677
Viun9g03446 227 FunFam WUSCHEL-related homeobox 4 80 147 - -
Viun9g03446 227 SUPERFAMILY Homeodomain-like 77 148 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03446 Viun-Chr9 40705187 40706419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03446 5 147 Wox Gene Family AT1G46480 66.049 6.66e-65 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Viun9g03446 Homeodomain 7.7e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03446 - - gmx:100781015 384.415