Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03445 ATGGAAGAAGAAGGTTTACGAGATTGCTGTTCCTCCAACTCCACCACCAACAGGAACACCAAGAAACGCAAGCAGCAACACCACCAAGACAAACCTTACAGAGGAATAAGGATGAGGAAGTGGGGGAAGTGGGTGGCGGAGATTAGAGAACCCAACAAGAGGTCCAGGATCTGGCTGGGTTCTTACTCCACCCCCGTCGCCGCCGCACGCGCCTACGACACCGCCGTCTTCTACCTCAGAGGCCCTTCCGCCCGCCTCAATTTCCCCGAACTCTTGTTCCAAGACGACGACGTTTCAACCCAAGAGGGCAACATGTCCGCTGATTGTATACGCAAGAAAGCGACCCAGGTCGGCGCGAGAGTGGACGCGCTCCAAACCGCGCTTCAATCCTCGTCGTCCCACTCCGCTAATTCCAGCCACGTCAGCTCTGACAAGCCAGACTTGAACGAGTATCCAAAACCCGAAGATTAG 471 0.5541 MEEEGLRDCCSSNSTTNRNTKKRKQQHHQDKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPELLFQDDDVSTQEGNMSADCIRKKATQVGARVDALQTALQSSSSHSANSSHVSSDKPDLNEYPKPED 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03445 156 MobiDBLite consensus disorder prediction 126 145 - -
Viun9g03445 156 MobiDBLite consensus disorder prediction 126 156 - -
Viun9g03445 156 Pfam AP2 domain 33 81 IPR001471 GO:0003700|GO:0006355
Viun9g03445 156 SUPERFAMILY DNA-binding domain 32 90 IPR016177 GO:0003677
Viun9g03445 156 MobiDBLite consensus disorder prediction 1 33 - -
Viun9g03445 156 CDD AP2 33 91 IPR001471 GO:0003700|GO:0006355
Viun9g03445 156 Gene3D AP2/ERF domain 32 90 IPR036955 GO:0003700|GO:0006355
Viun9g03445 156 SMART rav1_2 32 95 IPR001471 GO:0003700|GO:0006355
Viun9g03445 156 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 10 156 - -
Viun9g03445 156 ProSiteProfiles AP2/ERF domain profile. 32 89 IPR001471 GO:0003700|GO:0006355
Viun9g03445 156 FunFam Ethylene-responsive transcription factor 2 31 90 - -
Viun9g03445 156 PRINTS Ethylene responsive element binding protein signature 71 91 IPR001471 GO:0003700|GO:0006355
Viun9g03445 156 PRINTS Ethylene responsive element binding protein signature 33 44 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03445 Viun-Chr9 40692714 40693811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03445 29 131 AP2-EREBP Transcription Factor Family AT5G67190 74.766 2.70e-52 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Viun9g03445 AP2 8.5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03445 K09286 - gmx:100801528 266.544