Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03442 ATGGAAGCAGGGGAAGATTGCTGCGTCAAGGTCGCGGTCCATGTTCGGCCACTCATCGCCGATGAGAAGCTTCAAGGATGCAAAGACTGCGTCACCGTCGTTTCTGGGAAGCCGCAGGTACAAATTGGTGCTCACTCCTTTACATTTGATCATGTTTATGGAAGCACTGGTTCTCCCTCAAGTGCCATGTTTGAAGAATGTGTTGCTCCCCTTGTTGATGGTTTGTTTCAAGGATATAACGCTACTGTTCTCGCTTACGGTCAGACAGGTTCTGGGAAAACGTACACCATGGGAACTGGCTTTAAAGATGGTTTCCAAACCGGAATAATACCTCAAGTTATGAACGTTTTGTTTAGCAAAATTGGGACCCTAAAGCACCAGATTGATTTTCAGTTGCATGTGTCTTTTATTGAGATTCTTAAAGAAGAAGTAAGAGACTTGCTGGATCCCTCCTCCGTGAGCAAACCAGAAACTGCAAATGGACATTCAGGAAAAATGACCACTCCTGGGAAGCCACCAATACAAATTCGTGAGACATCGAATGGTGTCATCACCCTTGCAGGATCCACTGAAGTCAGTGTAACAACACTAAAGGAAATGGCTGCTTGCCTGGAACAGGGATCATTGAGCAGGGCAACTGGGAGCACAAATATGAACAACCAATCCAGTCGATCTCATGCCATCTTCACCATCACCTTAGAACAAATGCGAAAGCTGAATATTCCTGGTGATAGTGGTTTAAATGATACCATGAATGAAGAGTATCTTTGTGCCAAGTTGCACTTAGTAGATCTTGCTGGATCAGAACGAGCTAAAAGAACAGGGTCTGATGGTCTGCGTTTTAAGGAAGGAGTTCACATTAACAGAGGCCTTCTAGCCCTTGGCAATGTTATTAGTGCACTTGGTGATGAAAAGAAGCGAAAGGAAGGTGTTCATGTTCCTTATAGGGATAGTAAACTTACTAGGCTTTTGCAGGATTCACTAGGAGGTAACAGCAGAACTGTCATGATTGCTTGCATAAGTCCTGCTGATATTAATGCTGAGGAAACCCTTAACACTTTGAAGTACGCAAATCGTGCCCGCAATATCCAAAATAAGCCTGTTATCAATAGAGACCCCATGTCCAATGAGATGCTAAAAATGCGACAACAGCTAGAGTATTTGCAGGCAGAACTTTGTGCTCGAGCTGGTGGCTCTTCTGAGGAAGTTCAGGTCCTTAAGGAAAGGATTGCTTGGCTTGAAGCCGCTAATGAAGATCTTTGCCGTGAACTTCATGAATACCGTAGTAGATGTTCTATTGTAGAACCAGGTGAAAGGGAAGCTTATGATGGTAACACATACATTGTGAAGACTGATGCAATTAAGAGGAGCTTACCAATCATAGAAGCTGAGTATCCAATGAGTGAAACAGTGGGTGATTCTAGGGAAATTGAAGAAGTAGCGAAAGAGTGGGAGCACACACTTCTGCAGAATAGTATGGATAGAGAGTTACATGAATTGAATAAACGCTTGCAGCAGAAAGAGTCCGAGATGAAGCTTTTTGGAATATCTGATGCCGAAGTACTCAAGCAGCATTTTGGTAGAAAGATAACGGAATTGGAAGATGAGAAGAGAGTAGTGCAGCGAGAGAGAGATTGTCTTTTGGCAGAAGTTGAAAATCTCGCTGCCAATTCTGATGGACAAACACAGAAATTAGAGGATATTCATGCCCAAAAATTGAAAGCGCTTGAAGCACAGATTATGGATCTGAAGAAGAAGCAAGAGAGTCAGGTCCAGCTTCTGAAACAAAAGCAAAAAAGTGATGAAGCAGCAAAGAGACTGCAAGATGAAATACAGTGTATAAAGGCTCAAAAGGTTCAATTGCAGCAAAGGATAAAACAAGAATCAGAACAGTTTCGGCAGTGGAAGGCTTCAAGAGAGAAAGAGTTGTTGCAATTAAAGAAGGAGGGAAGAAGAAATGAGTATGAAAGACACAAGCTGCAAGCTTTAAATCAGCGGCAAAAATTGGTTCTTCAGAGAAAAACTGAAGAAGCTGCGATGGCTACCAAGAGGTTAAAGGAGTTGTTAGAAGCACGTAAAACTTCCGGCCGAGAGACTTCAGTTACAACGAATGGAAGTGGAACAAATGGTCAGAGCAATGAGAAGTCTTTACAACGGTGGCTTGATCATGAGCTAGAAGTCATGGTAAAGGAGCACGAAGTCCGTTTTGAGTATGAGAAACAGAGCCAAGTGCGAGCTGCCCTTGCAGAAGAATTAGCTATGCTGAAGCAAGTAAATGAGTTTGCTGCAAAGGGTCTCAGTCCTCCAAGAAAGAATGGATTTGCCAGGGCATCCTCAATGTCACCAAATGCAAGAATGGCCAGAATAGCTTCACTTGAGAACATGCTGAGTATATCATCTAATTCGCTTGTGGCAATGGCTTCTCAACTTTCTGAGGCAGAAGAACGAGAAAGGGCCTTCTCTAATCGTGGACGCTGGAATCAATTGCGTTCAATGGGAGAAGCCAAGAATTTGCTTCAATATATGTTTAATTCTGTTGCAGATGCTAGGTGCCAACTCTGGGAGAAGGACATGGAGATCAGGGAAATGAAAGATCAAATAAAAGAACTTGTTGGTCTCTTACGGCAAAGTGAGATGAAGAGAAAAGAAGTTGAAAAGGAACTAAAAGTGAGAGAGCAAGCTAATGGAAGCACATTGGCTACACCACCTTTGGGTGACTCCCCAAATCCATTGAAACAACAAGCTGAAGACGTGAAAGGACCTTTATCTCCAATGTCTATGCCAGTGCCTAAACAGCTAAAATACACGCCAGGGGTTGCCAATGGGTTGGTGAGGGAATCGGCAGCATTTGTTGATCAGGGTAAAAGGATGATACCCATCGGACACCTGTCAATGAAAAAACTAGCAATGGTAGGACAAGCTTCTGGAAAGTTATGGAGGTGGAAAAGAAGTCATCATCAGTGGCTGCTACAGTTCAAGTGGAAATGGCAGAAACCATGGAGACTTTCAGAATGGATACGACATAGTGATGAGACGATCATGAGAACAAAACCACGCTCACAGGTTTTGCCACGTATCAGGTGA 3084 0.4326 MEAGEDCCVKVAVHVRPLIADEKLQGCKDCVTVVSGKPQVQIGAHSFTFDHVYGSTGSPSSAMFEECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGFQTGIIPQVMNVLFSKIGTLKHQIDFQLHVSFIEILKEEVRDLLDPSSVSKPETANGHSGKMTTPGKPPIQIRETSNGVITLAGSTEVSVTTLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLNIPGDSGLNDTMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVINRDPMSNEMLKMRQQLEYLQAELCARAGGSSEEVQVLKERIAWLEAANEDLCRELHEYRSRCSIVEPGEREAYDGNTYIVKTDAIKRSLPIIEAEYPMSETVGDSREIEEVAKEWEHTLLQNSMDRELHELNKRLQQKESEMKLFGISDAEVLKQHFGRKITELEDEKRVVQRERDCLLAEVENLAANSDGQTQKLEDIHAQKLKALEAQIMDLKKKQESQVQLLKQKQKSDEAAKRLQDEIQCIKAQKVQLQQRIKQESEQFRQWKASREKELLQLKKEGRRNEYERHKLQALNQRQKLVLQRKTEEAAMATKRLKELLEARKTSGRETSVTTNGSGTNGQSNEKSLQRWLDHELEVMVKEHEVRFEYEKQSQVRAALAEELAMLKQVNEFAAKGLSPPRKNGFARASSMSPNARMARIASLENMLSISSNSLVAMASQLSEAEERERAFSNRGRWNQLRSMGEAKNLLQYMFNSVADARCQLWEKDMEIREMKDQIKELVGLLRQSEMKRKEVEKELKVREQANGSTLATPPLGDSPNPLKQQAEDVKGPLSPMSMPVPKQLKYTPGVANGLVRESAAFVDQGKRMIPIGHLSMKKLAMVGQASGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIRHSDETIMRTKPRSQVLPRIR 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03442 1027 Coils Coil 860 894 - -
Viun9g03442 1027 Gene3D Kinesin motor domain 2 391 IPR036961 -
Viun9g03442 1027 ProSitePatterns Kinesin motor domain signature. 258 269 IPR019821 GO:0003777|GO:0005524|GO:0007018
Viun9g03442 1027 MobiDBLite consensus disorder prediction 695 715 - -
Viun9g03442 1027 MobiDBLite consensus disorder prediction 894 908 - -
Viun9g03442 1027 MobiDBLite consensus disorder prediction 150 176 - -
Viun9g03442 1027 FunFam kinesin-like protein KIN-4A isoform X1 2 391 - -
Viun9g03442 1027 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1019 IPR027640 GO:0003777|GO:0007018
Viun9g03442 1027 SMART kinesin_4 6 371 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun9g03442 1027 Coils Coil 403 423 - -
Viun9g03442 1027 PRINTS Kinesin heavy chain signature 313 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun9g03442 1027 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun9g03442 1027 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun9g03442 1027 PRINTS Kinesin heavy chain signature 259 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun9g03442 1027 Coils Coil 490 510 - -
Viun9g03442 1027 ProSiteProfiles Kinesin motor domain profile. 8 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun9g03442 1027 MobiDBLite consensus disorder prediction 691 715 - -
Viun9g03442 1027 Pfam Kinesin motor domain 15 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun9g03442 1027 Coils Coil 566 638 - -
Viun9g03442 1027 CDD KISc_KIF4 7 364 - -
Viun9g03442 1027 MobiDBLite consensus disorder prediction 886 923 - -
Viun9g03442 1027 Coils Coil 523 557 - -
Viun9g03442 1027 Coils Coil 671 691 - -
Viun9g03442 1027 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 393 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03442 Viun-Chr9 40641357 40652401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03442 9 387 Calmodulin-binding Proteins AT5G65930 33.159 1.17e-52 199