Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03430 ATGCTCTGTAGAGGAATGCGAAACCACCTCTTTCTCCTTCTTCTATTCATCTCCACTTCATCTGCAGCCAGAGACACACTTCCAGAAGGTTCCTCACTTTCGGTAGAGAAACAAAGCGACATCCTCCTTTCATCCAATGGCGATTTTTCCGCCAGTTTCTTCCGAGTTGGTCAAAACGCCCTCTGCTTCTCCGTTTGCTTCACGCGCTCCAAACAACCCACCGTTTTATGGATGGCCAACCGTGACCAACCCGTCAACGGCAAAGGCTCCTTCCTCTCACTCCGGACAAACGGCAACCTCGTTTTGACTGATGCTGGAGGAACCATTATCTGGGAAACCGCCACTCTTTCCTCCTTCCAACTTCACCTAAAGCTAAGAAACAATGGAAACCTTCTTCTCCTCACTTCCGAAGGCACAACCATTTGGCAAAGCTTCGATTCCCCAACCGACACCCTTCTTCCAACGCAGCCACTCACGGAGCGAGGCGCCCTCGTTTCTCCGAGAAGTGCAACGAACCATTCCTCCGGACTCTACAAACTTTACTTCGACGACGAGTCCTTTCTTCGCTTACTCTACAAAGGTCACACTTTTCCCGGCGCGTACTGGCAAGCATCGTGGCAGCTTCCCACGGGCAGAACCAACTACAATATAACCAAAATCGCTTTGTTAGATTCCTTTGGACTCTTCACTTCCTCTGATGGGTTTGAATTCCGCTCCACCGATTATCCCAAAAAACTGTACAGGAGACTCAAGATGGATTCTGATGGTAATTTGCGTTTGTATAGCTTCAACGAGGAGCGTAAGATCTGGGAGGTGACGTGGCAAGTTGTTTCCCAACCGTGCTCCATTCATGGAATTTGTGGACAGAACAGCATCTGCAATCATGATCCTGTTATTGGGAGGACTTGCTATTGCTTGAACGGGTATAAGGTTAAGGATCCTAATGACTGGACTCAGGGCTGTGAGCCTGAGTTTTCTCCTTCTGATTTTTCTTGTAACAGTCGTCAGTCTTTGGGTTTTCTCCATCTTCCAAGCACGGAACTGAATGGCTATGATATGTCCTATGAATTCGTTTCGAGCTTAAAGGAATGCCAAAATCGATGTCTGGCACTTTGTGATAAATGTGTAGCTGTTGAGTTCAGGTTTAATGAGTTTGGAGAACATGGTTGTTACCTGAAAAAGGTGGCATTCAATGGAAGGGTTAGTCCTAGTTACGATAAAGATACGTATCTAAAGTTGCCAAATGCGATTTTGCGCTCGTCCGCGAAGATTCCAAAGCATTCCCGGATGAATTGCTCCGTTCGTTTGTCTCAAAATTTGAACAGGGTTTATCAGCCGCTAAAAAAAAACTCCACATTGAGTTTCTTGGTTTGGTTCGCTTGCGGGGTCGGGGTGTTTGAGTTTTCCACCATTTTCATAGTGTGGTTCTTCTTTTTCAGAACAAGTAAACAGCCTGACACGCTGGATCAACAAAAACACCTTCTGTCTGCCACAGGGTTTGAGAGGTTCACCTATGCAGAGCTAAGATCCGCGACAAAAGGGTTCAAAGAAGAGGTGGGGCGAGGAGCAGGAGGGGTTGTTTATAAAGGGACATTATATGATAACCGTGTTGCGGCTATTAAACGCTTAAACGAAGCTACTCAAGGGGAGGCTGAATTTTTGGCTGAAATAAGCACAATTGGGATGCTGAACCACATGAATTTGATTGACATGTGGGGGTATTGCGTTGAAGGGAAGCACAGGCTTTTAGTGTATGAGTACATGGAACATGGATCCTTAGCAGACAATCTATTTGGCAACGCACTTGATTGGAAGAAACGGTTCAACGTTGCTGTGGGCACAGCGAGAGGTTTGGCTTACTTACACGAAGAGTGTTTGGAGTGGATTTTGCATTGCGACGTGAAGCCTCAAAACATTCTCCTTGACTCAGAGTTCCAACCAAAAGTAGCAGATTTTGGATTGTCAAAACTTTTAAACAGAGACGAGCGTGTAAATTCTAGTTTTTCACGAATAAGAGGAACTCGAGGGTACATGGCTCCGGAGTGGGTTTACAATCTCCGTATCACTTCGAAGGTGGATGTTTATAGCTATGGGATTGTGGTGTTGGAAATGGTGAGTGGAAGAAGTCCTATGGCAATCCACAGTCTTGAGAACAGTGGGAATATAGAGAAGCATCGGCTGGTGACGTGGATAAGGGAGAAGATAAAGCTTGCACCCACTTTTGGGTTTAGGATGTTGGAGATAATTGATCCCAGCTTAGAAGGAAACTTCGATGTTTCCGAAGCAGAGGTTTTGGTTGAAGTGGCTTTGCAGTGCGTGGAAGATGACATGAATGAAAGACCATCCATGAGTCAAGTTACAGAGATGCTTCAGGCTCATCAAAATAAACTCCTCCCTCGTTAG 2403 0.4586 MLCRGMRNHLFLLLLFISTSSAARDTLPEGSSLSVEKQSDILLSSNGDFSASFFRVGQNALCFSVCFTRSKQPTVLWMANRDQPVNGKGSFLSLRTNGNLVLTDAGGTIIWETATLSSFQLHLKLRNNGNLLLLTSEGTTIWQSFDSPTDTLLPTQPLTERGALVSPRSATNHSSGLYKLYFDDESFLRLLYKGHTFPGAYWQASWQLPTGRTNYNITKIALLDSFGLFTSSDGFEFRSTDYPKKLYRRLKMDSDGNLRLYSFNEERKIWEVTWQVVSQPCSIHGICGQNSICNHDPVIGRTCYCLNGYKVKDPNDWTQGCEPEFSPSDFSCNSRQSLGFLHLPSTELNGYDMSYEFVSSLKECQNRCLALCDKCVAVEFRFNEFGEHGCYLKKVAFNGRVSPSYDKDTYLKLPNAILRSSAKIPKHSRMNCSVRLSQNLNRVYQPLKKNSTLSFLVWFACGVGVFEFSTIFIVWFFFFRTSKQPDTLDQQKHLLSATGFERFTYAELRSATKGFKEEVGRGAGGVVYKGTLYDNRVAAIKRLNEATQGEAEFLAEISTIGMLNHMNLIDMWGYCVEGKHRLLVYEYMEHGSLADNLFGNALDWKKRFNVAVGTARGLAYLHEECLEWILHCDVKPQNILLDSEFQPKVADFGLSKLLNRDERVNSSFSRIRGTRGYMAPEWVYNLRITSKVDVYSYGIVVLEMVSGRSPMAIHSLENSGNIEKHRLVTWIREKIKLAPTFGFRMLEIIDPSLEGNFDVSEAEVLVEVALQCVEDDMNERPSMSQVTEMLQAHQNKLLPR 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03430 800 FunFam Serine/threonine-protein kinase 588 797 - -
Viun9g03430 800 SMART blect_4 33 148 IPR001480 -
Viun9g03430 800 SMART serkin_6 513 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g03430 800 Pfam D-mannose binding lectin 74 158 IPR001480 -
Viun9g03430 800 ProSiteProfiles Bulb-type lectin domain profile. 18 146 IPR001480 -
Viun9g03430 800 CDD STKc_IRAK 519 791 - -
Viun9g03430 800 PIRSF SRK 2 800 IPR024171 GO:0004674
Viun9g03430 800 Gene3D Phosphorylase Kinase; domain 1 479 587 - -
Viun9g03430 800 CDD PAN_AP_plant 331 414 - -
Viun9g03430 800 SUPERFAMILY Protein kinase-like (PK-like) 490 791 IPR011009 -
Viun9g03430 800 Pfam Protein kinase domain 516 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g03430 800 FunFam S-receptor-like serine/threonine-protein kinase 482 587 - -
Viun9g03430 800 Gene3D - 18 147 IPR036426 -
Viun9g03430 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Viun9g03430 800 PANTHER OS07G0415500 PROTEIN 10 791 - -
Viun9g03430 800 ProSitePatterns Protein kinases ATP-binding region signature. 519 541 IPR017441 GO:0005524
Viun9g03430 800 ProSiteProfiles PAN/Apple domain profile. 332 414 IPR003609 -
Viun9g03430 800 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 203 IPR036426 -
Viun9g03430 800 Pfam S-locus glycoprotein domain 243 312 IPR000858 GO:0048544
Viun9g03430 800 Gene3D Transferase(Phosphotransferase) domain 1 588 798 - -
Viun9g03430 800 ProSiteProfiles Protein kinase domain profile. 513 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03430 Viun-Chr9 40532610 40535291 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03430 454 792 Receptor kinase-like Gene Family AT5G45780 37.536 2.68e-67 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Viun9g03430 Pkinase 1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03430 - - gmx:100816469 1193.33