Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03429 ATGCTCTGCAGAGGAATGCGAAACCACCTCTTTCTCCTTCTTCTCTTCATCTCCACTTCATCTGTAGCCAGAGACACACTTCCAGAAGGTTCCTCACTTTCGGTAGAGAAACAAAGTGACATCCTCCTTTCATCCAATGGCGATTTTTCCGCCGGTTTCTTCCGAGTTGGTCAAAACGCCTTCTGCTTCTCCGTTTGCTTCACGCGCTCCAAACAACCCACCGTTTTATGGATGGCCAAACGTGACCAACCCGTCAACGGCAAAGGCTCCTTCCTCTCACTCCGGAAAAGCGGCAACCTCGTTTTGACGGATGCTGGAGGAACCATTATCTGGGAAACCGCCACTCTTTCCTCCTTCCAACTTCACCTAAAGCTAAGAAACAATGGAAACCTTCTTCTCCTCACTTCCGAAGGCACAACCATTTGGCAAAACTTCGATTCCCCAACGGATACCCTTCTTCCAACGCAGCCACTCACAGAGCGAGTCGCTCTCGTTTCTCCGAGAAGTGCAACGAACCATTCCTCCGGATTCTACAAACTTTACTTCGACGACGAGTCCTTTCTTCGCTTACTCTACAAAGGTCACACGTTTTCCAGCGTGTACTGGCCAGCACCGTGGCAGCTTCCAACTGTTCCAACTGACATAGGCAGAACCAACTACAATTTCACCAAAACCGCTTTGTTAGATTCCTTTGGACTCTTCACTTCCTCTGATGGGTTTGAATTCCGCTCCACCGATTATCCCAAAAAACTGTACAGGAGACTCAAGATGGATTCTGATGGTAATGTGCGTTTGTATAGCTTCAACGAGGAGCGTAAGATCTGGGAGGTGACGTGGCAAGTTGTTTCCCAACCGTGCTCCATTCATGGAATTTGTGGACAGAACAGCATCTGCAATCATGATCCTGTTATTGGGAGGACTTGCTATTGCTTGAAAGGGTATAAGGTTAAGGATCCTAATGACTGGACTCAGGGCTGTGAGCCCGAGTTTTCTCCTTCTGATTTTTCTTGCAACAGTCGTCAGTCTTTGGGTTTTCTCCGTCTTCCAAACATGGACCTGTACGGCTATGATATGTCCTATGGAATCGTTTCGAGCTTAAAGGAATGCCAGAATCTATGTCTGGCGCTTTGTGATGAATGTGTAGCTGTTCAATTAAAGTTTAACGAATTTGGAACATTTCGTTGTTATGTGAAAAAGGTGGCATTCAATGGAAGGGATAGTCCTCATATAATTGTAGATACCTATATAAAGTTGCCAAATTCGATTTTGCGCTCGTCCACAAAGATTCTAAAACATTCCAGGATGAATTGCTCCGTCGGTTTGTCTCAAAAGTTGAACAGGTTTTATCAGCCGCCAGAAAAAAACTCCACGTTGAGTTTCTTGGTTTGGTTCGCTTTCGGGGTCGGGGTGTTTGAGTTTTCCACCATTTTCCTCGTGTGGTTCTTCTTGTTCAGAACAAGCAAGAACCCTGACCCGCTGGATGAACAACAACACCTTCTGTCTGCCACAAGGTTTCAGAGGTTCACGTACGCAGAGCTAAAATCCGCAACAAGAGGGTTCAAAGAGGAGGTTGGGCGAGGAGCGGGAGGGGTTGTTTACAAAGGGACATTATATGATAACCGTGTTGCGGCTATTAAACGCTTAAACGAAGCTACTCAGCGAGAAGCTGAATTTTTGGCTGAAATAAGAACAATTGGGATGCTGAACCACATGAATTTGATTGACATGTGGGGTTACTGCGTTGAAGGGAAGCACAGGCTTTTAGTGTATGAGTACATGGAATATGGATCCTTAGCGGACAATCTATTTGGCAACGCACTTGATTGGAAGAAAAGGTTCAACGTTGCTGTGGGCACAGCAAGAGGTTTGGCTTACTTACACGAAGAGTGTTTGGAGTGGATTTTGCATTGCGACGTAAAGCCTCAAAACATTCTCCTTAACTCAGAGTTCCAACCAAAAGTAGCAGATTTTGGGTTGTCAAAACTTTTAAACAGAGACGAGCGTAGAAATTGTAGTTTTTCAGGAATAAGAGGGACTAGAGGGTACATGGCTCTGGAATGGGCTTACAATCTCCGTATCACTTCGAAGGTGGATGTTTATAGCTATGGGATAGTGGTGTTGGAAATGGTGAGTGGAAGAAGTCCTATGGCAATTCACAGTCTTGAGAACAGTGGGAATATAGAGAAGCATCGGCTTGTGACGTGGATAAGGGAGAAGATAAAGCTTGCACCCACTTTTGGGTTTCGGATGGAGGAGATAATTGATCCCAGCTTAGAAGGAAACTACAACGTTTCAGAAGTAGAGGTTTTGGTTGAAGTGGCTTTGCAGTGCGTGCAAGATGATATGAATGAAAGACCATCCATGAGCCAAGTTGCAGAGATGCTTCGGGCTCATCAAAATAAACTCCTACCTCTTTAA 2418 0.4533 MLCRGMRNHLFLLLLFISTSSVARDTLPEGSSLSVEKQSDILLSSNGDFSAGFFRVGQNAFCFSVCFTRSKQPTVLWMAKRDQPVNGKGSFLSLRKSGNLVLTDAGGTIIWETATLSSFQLHLKLRNNGNLLLLTSEGTTIWQNFDSPTDTLLPTQPLTERVALVSPRSATNHSSGFYKLYFDDESFLRLLYKGHTFSSVYWPAPWQLPTVPTDIGRTNYNFTKTALLDSFGLFTSSDGFEFRSTDYPKKLYRRLKMDSDGNVRLYSFNEERKIWEVTWQVVSQPCSIHGICGQNSICNHDPVIGRTCYCLKGYKVKDPNDWTQGCEPEFSPSDFSCNSRQSLGFLRLPNMDLYGYDMSYGIVSSLKECQNLCLALCDECVAVQLKFNEFGTFRCYVKKVAFNGRDSPHIIVDTYIKLPNSILRSSTKILKHSRMNCSVGLSQKLNRFYQPPEKNSTLSFLVWFAFGVGVFEFSTIFLVWFFLFRTSKNPDPLDEQQHLLSATRFQRFTYAELKSATRGFKEEVGRGAGGVVYKGTLYDNRVAAIKRLNEATQREAEFLAEIRTIGMLNHMNLIDMWGYCVEGKHRLLVYEYMEYGSLADNLFGNALDWKKRFNVAVGTARGLAYLHEECLEWILHCDVKPQNILLNSEFQPKVADFGLSKLLNRDERRNCSFSGIRGTRGYMALEWAYNLRITSKVDVYSYGIVVLEMVSGRSPMAIHSLENSGNIEKHRLVTWIREKIKLAPTFGFRMEEIIDPSLEGNYNVSEVEVLVEVALQCVQDDMNERPSMSQVAEMLRAHQNKLLPL 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03429 805 PANTHER OS07G0415500 PROTEIN 10 796 - -
Viun9g03429 805 CDD STKc_IRAK 524 795 - -
Viun9g03429 805 SMART blect_4 33 148 IPR001480 -
Viun9g03429 805 SMART serkin_6 518 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g03429 805 ProSitePatterns Protein kinases ATP-binding region signature. 524 546 IPR017441 GO:0005524
Viun9g03429 805 PIRSF SRK 2 805 IPR024171 GO:0004674
Viun9g03429 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Viun9g03429 805 ProSiteProfiles Bulb-type lectin domain profile. 18 146 IPR001480 -
Viun9g03429 805 SUPERFAMILY Protein kinase-like (PK-like) 494 795 IPR011009 -
Viun9g03429 805 Gene3D Transferase(Phosphotransferase) domain 1 593 802 - -
Viun9g03429 805 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 204 IPR036426 -
Viun9g03429 805 FunFam S-receptor-like serine/threonine-protein kinase 487 592 - -
Viun9g03429 805 ProSiteProfiles PAN/Apple domain profile. 337 419 IPR003609 -
Viun9g03429 805 Pfam Protein kinase domain 521 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g03429 805 Gene3D - 18 147 IPR036426 -
Viun9g03429 805 FunFam Putative receptor-like protein kinase 593 801 - -
Viun9g03429 805 ProSiteProfiles Protein kinase domain profile. 518 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g03429 805 Pfam S-locus glycoprotein domain 248 317 IPR000858 GO:0048544
Viun9g03429 805 Gene3D Phosphorylase Kinase; domain 1 485 592 - -
Viun9g03429 805 CDD PAN_AP_plant 336 419 - -
Viun9g03429 805 Pfam D-mannose binding lectin 74 158 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03429 Viun-Chr9 40526497 40529292 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03429 438 797 Receptor kinase-like Gene Family AT5G45780 36.043 1.85e-64 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Viun9g03429 Pkinase 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03429 - - gmx:100816469 1195.26