Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03428 ATGTGGTTCATCCTTCTCTCTCTCGTTATGTCTCTGCAACTTTCATCTTCAGCAGTAGAAATCCTGCATCAAGGTTCATCCCTCTTGGTGGAGGACCCCAACGATGTCATGCTCTCACCAAATGCCATCTTCTGTGCGGGTTTCTATGCCGTTGGCCAAAACGCATATTCCTTCGCAGTTTGGTACTCCCAAACCAACGGCGAAACCCAGGATGCAACCGTCGTATGGATGGCGAACCGTGACTACCCCGTTAACGGCAAGGGTTCCAAGCTTTCCCTTCTTCCCAACGGCAACCTCGCCTTAAGGGACGCCGACGAATCCCACGTTTGGTCCACAAACACCGTTTCACTGTCGTCTGTGCAACTGTTTCTCGACAACACTGGCAACCTCGTTCTGCGCGAAACGAAGGGCGGCGGTGTCGTCTTGTGGCAGAGCTTTGATTTCCCTACGGACACGCTTTTGCCTCAACAGGTGTTCACGAGATACGCGAAGCTGGTCTCTTCTAGAAGCGAGACCAACAAGTCCTCCGGTTTCTACTCGTTGTTCTTCGACAACGACAACGTTCTTCGTCTTCTTTACGATGGTCCTGAAGTTTCTGGCCTTTACTGGCCAGATCCATGGTTGGCCACTTGGGACGCTGGACGTTCCACTTACAACAACAGTAGAGTTGCGGTGATGGACACACTCGGCAATTTTAGTTCTTCAGATGATTTCTCTTTTCTGACATCTGATTATGGCACTGTGATCCAAAGAAGATTAGTGCTTGATCATGATGGAAACATTCGCGTTCATAGTCGCAAAAATGGTGGAGAGAAATGGTCTATTACGTGGCAAGCCAAAGCAAGACCGTGTAGTATTCATGGTGTTTGTGGCCCTAACAGTTTGTGCTCTTACCACCAAAATTCAAGTGTGAAGTGCTCTTGCCTTCCCGGGTATAAGTGGAAGAATGACCACGATTGGTCTTTTGGATGTGAACCGAAATTCTCTACGCTTTGCAACAAAACCCAGTCTCGGTTTTTGTATATAAGCAACGTGGAGTTATATGGCTATGACTACGGGATTTTGACAAATTACACTCTCCATCAGTGTCAGCAGTTATGCCTTCAATTATGCGACTGTAAAGGCATTCAGTATACATATGTCTTTGGCAGTGGCACTTATACTTGTTACCCGAAGTTGCAGCTGCGGAATGCGTATCAGACACCGTATTTCAACGCTGATCTGTACTTGAAACTTCCAGCAAATAGTTCATATTCTTTTGAAGGATCCACAGACGAGCACAGTGTTGATTGCTCTTCGAGTTTGAGCACGGTGCAGCTTGAGAGAGCGTATGACATGAGTCATGAGAACAGATATGTGAAGTTCTTGCTTTGGTTTGTAGGAGGATTGGGGGCATTCGAAGTTTTGTGCATATTTGTGATTTGTTTTTTTGTGGTGAGAACAAGGGAGAGGAAATATTCTGGTGTGGATAGACGAGTCTATAACTTGGCCATGAATGGTTTCAGAAAGTTCAGCTATTCTGAACTGAAACAAGCCACGAAAGGGTTTCGTGAGGAGATAGGAAGGGGTGCAGGAGGGGTTGTATTCAAGGGTGTGTTGTTGGATCAACGAGTTGCGGCTGTGAAGAGACTGAAGGATGCGAATCAAGGAGAAGAAGATTTCCTTGCAGAAGTAAGCAGCATTGGAAGGCTTAACCATATGAACTTGATTGAGATGTGGGGGTATTGTGCTGAGGGAAAACATAGACTCTTGGTGTATGAGTACATGGAGCAAGGGTCTCTAGCACAAAATATCGAGTCCGATGAATTGGACTGGACCAAAAGGTTTGACATAGCACTAGGTACAGCAAGAGGATTGGCTTATGTTCACGAGGAGTGTTTGGAGTGGATTCTACACTGTGATGTAAAGCCCCAAAACATTCTTCTAGATTCTAACTATCATCCAAAGGTAGCGGATTTTGGGCTGTCGAAGCTGCGAAACAGAAATGATAGTAGTACATACTCTAGTTTTTCACGGATACGAGGAACAAGAGGTTACATGGCTCCCGAGTGGGTTTTGAACCAACGAATCACGTCCAGAGTTGATGTTTATAGCTATGGGATTGTTGTTTTGGAAATGGTGACAGGAAAGAGTGCAACGAAGTATGTTGATGGCAGTGATAATGGAGTGGAGAAAGAGCATCTGGGCATGGTGGCGTGGCTTAAAGATAAAGAGAAAAATGGATGTGGTTGGGTTGGTGAAATATTGAAACCCAATGTAAAAGGAGTTTACGAGGAGGATAAGATTGAAGCTTTGGTGAGAGTGGCTCTGCAATGCGTTGAAGAAGAAAAGGATAAGAGACCCACAATGAGTCAAGTGGTAGAAATGCTTCTGAAATGTAGACGCGAAGATGATAATCTGGGATCATCACACGTGAGTGTCATCTCATAA 2430 0.4543 MWFILLSLVMSLQLSSSAVEILHQGSSLLVEDPNDVMLSPNAIFCAGFYAVGQNAYSFAVWYSQTNGETQDATVVWMANRDYPVNGKGSKLSLLPNGNLALRDADESHVWSTNTVSLSSVQLFLDNTGNLVLRETKGGGVVLWQSFDFPTDTLLPQQVFTRYAKLVSSRSETNKSSGFYSLFFDNDNVLRLLYDGPEVSGLYWPDPWLATWDAGRSTYNNSRVAVMDTLGNFSSSDDFSFLTSDYGTVIQRRLVLDHDGNIRVHSRKNGGEKWSITWQAKARPCSIHGVCGPNSLCSYHQNSSVKCSCLPGYKWKNDHDWSFGCEPKFSTLCNKTQSRFLYISNVELYGYDYGILTNYTLHQCQQLCLQLCDCKGIQYTYVFGSGTYTCYPKLQLRNAYQTPYFNADLYLKLPANSSYSFEGSTDEHSVDCSSSLSTVQLERAYDMSHENRYVKFLLWFVGGLGAFEVLCIFVICFFVVRTRERKYSGVDRRVYNLAMNGFRKFSYSELKQATKGFREEIGRGAGGVVFKGVLLDQRVAAVKRLKDANQGEEDFLAEVSSIGRLNHMNLIEMWGYCAEGKHRLLVYEYMEQGSLAQNIESDELDWTKRFDIALGTARGLAYVHEECLEWILHCDVKPQNILLDSNYHPKVADFGLSKLRNRNDSSTYSSFSRIRGTRGYMAPEWVLNQRITSRVDVYSYGIVVLEMVTGKSATKYVDGSDNGVEKEHLGMVAWLKDKEKNGCGWVGEILKPNVKGVYEEDKIEALVRVALQCVEEEKDKRPTMSQVVEMLLKCRREDDNLGSSHVSVIS 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03428 809 PIRSF SRK 1 808 IPR024171 GO:0004674
Viun9g03428 809 SUPERFAMILY Protein kinase-like (PK-like) 494 791 IPR011009 -
Viun9g03428 809 ProSiteProfiles Protein kinase domain profile. 514 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g03428 809 SMART blect_4 26 149 IPR001480 -
Viun9g03428 809 ProSiteProfiles Bulb-type lectin domain profile. 13 145 IPR001480 -
Viun9g03428 809 ProSiteProfiles PAN/Apple domain profile. 332 413 IPR003609 -
Viun9g03428 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Viun9g03428 809 Gene3D Phosphorylase Kinase; domain 1 478 588 - -
Viun9g03428 809 ProSitePatterns Protein kinases ATP-binding region signature. 520 542 IPR017441 GO:0005524
Viun9g03428 809 Pfam D-mannose binding lectin 73 161 IPR001480 -
Viun9g03428 809 Pfam S-locus glycoprotein domain 236 315 IPR000858 GO:0048544
Viun9g03428 809 Pfam Protein kinase domain 518 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g03428 809 Gene3D - 17 148 IPR036426 -
Viun9g03428 809 SMART serkin_6 514 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g03428 809 FunFam Serine/threonine-protein kinase 150 277 - -
Viun9g03428 809 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 589 798 - -
Viun9g03428 809 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 204 IPR036426 -
Viun9g03428 809 CDD STKc_IRAK 520 792 - -
Viun9g03428 809 Gene3D Transferase(Phosphotransferase) domain 1 589 806 - -
Viun9g03428 809 SMART ntp_6 334 412 IPR003609 -
Viun9g03428 809 PANTHER OS07G0415500 PROTEIN 5 792 - -
Viun9g03428 809 FunFam S-receptor-like serine/threonine-protein kinase 483 588 - -
Viun9g03428 809 CDD B_lectin 38 149 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03428 Viun-Chr9 40519622 40522384 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03428 469 790 Receptor kinase-like Gene Family AT5G20050 39.143 1.31e-62 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Viun9g03428 Pkinase 4.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03428 - - gmx:100792388 1324.69