Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03420 ATGGAGACTCGTGCTGCCTCAAAGAGAAAGGCAAATGCAATGGTCTTGGTCCAAAAACAACACCCCAAAAGGCATAGGGTTGCGTTGGCTGAACTCCCCAATTTACCAAATCTTATTGTCCCAGGAACTCAGAATCCTTCCAAAGAGAAATCGCGAGGTGTGAAGAATCTCAATGCGAAGAAGCCATCTCCCAAATCTGACCACTCTTCTTCCTTCCATATAGATGAATCCATTGTTTCCGATCTCTATGAGTATCTTCATGAAATGGAGATGCAGAAAAAGAGGAGACCAATGGTTGACTACCTTGAGAAAGTGCAGAAACTAGTTACACCTACCATGAGAGCAATCTTGGTGGATTGGTTAGTAGAAGTGGGTGAGGAGTACAAACTTCTTCCGGACACTCTTCATCTCTCTGTTTCATACATTGATAGGTTTTTGTCCATTAATCCTGTGACTAAATCGAAACTTCAGTTACTTGGTGTTTCCTCCATGCTCATTGCATCCAAATACGAGGAAATGGATCCACCTTGTGTGAATGATTTTTGCAGTATCACTGATTACACATATGACAAGGCAGAGGTTGTTAAGATGGAAGCTGACATACTAAAGTCACTAAACTTTGAAATGGGAAATCCTACTGTGAATACCTTTCTCAGGAGGTTTGCTGATGTTGCTTCTGATAACAAATTGACTACAAATTCACAGATTGAATTTTTGGGACGCTATCTGGCTGAGCTAAGTTTGCTGGACTATGATTTGTTGAGATTTTTGCCTTCTGTTGTGGCAGCGTCAGCTGTATTTCTTTCCAGATTTATTGTCTCGCCTGAAGTGCATCCATGGACCCCTTCTTTGAGTGAATGCTCGGGTTACAAACCATCTGAATTGAAAGAATGTGTCCTAACCTTGCATGACCTATACTTGTTACGAAAAGCAGCGTCTTTCAAAGCTGTCCGGAATAAGTACAAGCAGCAAAAGTTTAAATGTGTTGCAAACCTGCCTTCCCCTCCTTATGTACTGAATTGTTACTTTGAAGACCAGTGA 1041 0.415 METRAASKRKANAMVLVQKQHPKRHRVALAELPNLPNLIVPGTQNPSKEKSRGVKNLNAKKPSPKSDHSSSFHIDESIVSDLYEYLHEMEMQKKRRPMVDYLEKVQKLVTPTMRAILVDWLVEVGEEYKLLPDTLHLSVSYIDRFLSINPVTKSKLQLLGVSSMLIASKYEEMDPPCVNDFCSITDYTYDKAEVVKMEADILKSLNFEMGNPTVNTFLRRFADVASDNKLTTNSQIEFLGRYLAELSLLDYDLLRFLPSVVAASAVFLSRFIVSPEVHPWTPSLSECSGYKPSELKECVLTLHDLYLLRKAASFKAVRNKYKQQKFKCVANLPSPPYVLNCYFEDQ 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03420 346 ProSitePatterns Cyclins signature. 114 145 IPR006671 -
Viun9g03420 346 CDD CYCLIN_AtCycA-like_rpt2 212 326 - -
Viun9g03420 346 PANTHER CYCLINS 61 329 IPR039361 -
Viun9g03420 346 Gene3D - 95 210 - -
Viun9g03420 346 SUPERFAMILY Cyclin-like 79 209 IPR036915 -
Viun9g03420 346 MobiDBLite consensus disorder prediction 38 52 - -
Viun9g03420 346 Gene3D - 81 331 - -
Viun9g03420 346 FunFam G2/mitotic-specific cyclin 97 208 - -
Viun9g03420 346 SMART Cyclin_C_2 212 335 IPR004367 -
Viun9g03420 346 SUPERFAMILY Cyclin-like 212 336 IPR036915 -
Viun9g03420 346 MobiDBLite consensus disorder prediction 38 71 - -
Viun9g03420 346 Pfam Cyclin, C-terminal domain 212 334 IPR004367 -
Viun9g03420 346 SMART cyclin_7 216 304 IPR013763 -
Viun9g03420 346 SMART cyclin_7 119 203 IPR013763 -
Viun9g03420 346 FunFam Cyclin superfamily protein, putative 209 281 - -
Viun9g03420 346 Pfam Cyclin, N-terminal domain 81 209 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03420 Viun-Chr9 40481811 40484599 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03420 3 345 Core Cell Cycle Gene Families AT5G43080 54.310 2.01e-125 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03420 K06627 - gmx:547779 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03420 9 40481811 40484599 Viun9g03420 9 40481811 40484599 ECH