Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03419 ATGGAGACTCGTGCTGCCTCAAAGAGAAAGGCAAATGCAATGGTCTTGGTCCAAAAACAACACCCCAAAAGGCATAGGGTTGCGTTGGCTGAACTCCCCAATTTACCAAATCTTATTGTCCCAGGAACTCAGAATCCTTCCAAAGAGAAATCGCGAGGTGTGAAGAATCTCAATGCGAAGAAGCCATCTCCCAAATCTGACCACTCTTCTTCCTTCCATATAGATGAATCCATTGTTTCCGATCTCTATGAGTATCTTCATGAAATGGAGAAAAAGAGGAGACCAATGGTTGACTACCTTGAGAAAGTGCAGAAACTAGTTACACCTACCATGAGAGCAATCTTGGTGGATTGGTTAGTAGAAGTGGGTGAGGAGTACAAACTTCTTCCGGACACTCTTCATCTCTCTGTTTCATACATTGATAGGTTTTTGTCCATTAATCCTGTGACTAAATCGAAACTTCAGTTACTTGGTGTTTCCTCCATGCTCATTGCATCCAAATACGAGGAAATGGATCCACCTTGTGTGAATGATTTTTGCAGTATCACTGATTACACATATGACAAGGCAGAGGTTGTTAAGATGGAAGCTGACATACTAAAGTCACTAAACTTTGAAATGGGAAATCCTACTGTGAATACCTTTCTCAGGAGGTTTGCTGATGTTGCTTCTGATAACAAATTGACTACAAATTCACAGATTGAATTTTTGGGACGCTATCTGGCTGAGCTAAGTTTGCTGGACTATGATTTGTTGAGATTTTTGCCTTCTGTTGTGGCAGCGTCAGCTGTATTTCTTTCCAGATTTATTGTCTCGCCTGAAGTGCATCCATGGACCCCTTCTTTGAGTGAATGCTCGGGTTACAAACCATCTGAATTGAAAGAATGTGTCCTAACCTTGCATGACCTATACTTGTTACGAAAAGCAGCGTCTTTCAAAGCTGTCCGGAATAAGTACAAGCAGCAAAAGTTTAAATGTGTTGCAAACCTGCCTTCCCCTCCTTATGTACTGAATTGTTACTTTGAAGACCAGTGA 1035 0.4145 METRAASKRKANAMVLVQKQHPKRHRVALAELPNLPNLIVPGTQNPSKEKSRGVKNLNAKKPSPKSDHSSSFHIDESIVSDLYEYLHEMEKKRRPMVDYLEKVQKLVTPTMRAILVDWLVEVGEEYKLLPDTLHLSVSYIDRFLSINPVTKSKLQLLGVSSMLIASKYEEMDPPCVNDFCSITDYTYDKAEVVKMEADILKSLNFEMGNPTVNTFLRRFADVASDNKLTTNSQIEFLGRYLAELSLLDYDLLRFLPSVVAASAVFLSRFIVSPEVHPWTPSLSECSGYKPSELKECVLTLHDLYLLRKAASFKAVRNKYKQQKFKCVANLPSPPYVLNCYFEDQ 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03419 344 Gene3D - 81 329 - -
Viun9g03419 344 MobiDBLite consensus disorder prediction 1 22 - -
Viun9g03419 344 Pfam Cyclin, C-terminal domain 210 332 IPR004367 -
Viun9g03419 344 SMART Cyclin_C_2 210 333 IPR004367 -
Viun9g03419 344 PANTHER CYCLINS 61 327 IPR039361 -
Viun9g03419 344 MobiDBLite consensus disorder prediction 38 52 - -
Viun9g03419 344 FunFam Cyclin superfamily protein, putative 207 279 - -
Viun9g03419 344 SMART cyclin_7 117 201 IPR013763 -
Viun9g03419 344 SMART cyclin_7 214 302 IPR013763 -
Viun9g03419 344 SUPERFAMILY Cyclin-like 78 207 IPR036915 -
Viun9g03419 344 SUPERFAMILY Cyclin-like 210 334 IPR036915 -
Viun9g03419 344 Gene3D - 95 208 - -
Viun9g03419 344 CDD CYCLIN_AtCycA-like_rpt2 210 324 - -
Viun9g03419 344 MobiDBLite consensus disorder prediction 35 71 - -
Viun9g03419 344 Pfam Cyclin, N-terminal domain 81 207 IPR006671 -
Viun9g03419 344 ProSitePatterns Cyclins signature. 112 143 IPR006671 -
Viun9g03419 344 FunFam G2/mitotic-specific cyclin 95 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03419 Viun-Chr9 40481811 40484599 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03419 3 343 Core Cell Cycle Gene Families AT5G43080 54.624 6.20e-127 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03419 K06627 - gmx:547779 513.457