Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03418 ATGGAGACTCGTGCTGGGAGAAAGAGAAAAGAAGCTGTTGTGGTGGTGGAAAAACAGCACCCCAAAATGCATAGGGTTGTATTGGGTGAACTTCCCAATCTACCAAACCTTATTGTCCCCGAAAATCAAAATCTGTCCAAACAGAAAGTTCCATGTTTGAAAAATCCCAACATCAAGAAACTATCTTCTCCTCAGATAGACCCCCATTATGTGTCTGACATCAATGAATATCTTCGTGCAATGGAGACCAAAAGAAGACCAATAGTTAACTACATGGACAAAGTTCAATTGGTTGTTACCACAAACATGAGACAAATATTGGTGGATTGGTTAGTAGATGTTGCTGTGGAGTATAAGCTTCTCTCTGAAACTCTTCATCTATGTGTGTCATATATAGATAGGTTTTTATCGGTCAGTCCTGTGACAAAATCGAAGCTTCAATTAGTAGGTGTTTCTTCCATGCTTCTTGCCTCGAAGTACGAGGAAACTAAACCACCCAGGGTGGACAAATTTTGCAGCATAACTGATAACACTTTTGAAAAGGAAGAGGTTGTAAGGATGGAAGCTGAAATACTTAAGTCTCTGAACTTTGAAATGGGCAATCCTACTGCAATCACTTTTCTAAAGAGATTTTTGAGTGTTGCTTCTGTGAACCAAAAAACACCAAATTTGAAGATTGAGTTTCTGAGTTTCTACCTTGCTGAGCTGAGTTTGTTGGATTATGGTTGTATAAGATTCTTGCCTTCCATTATAGCTGCATCTGCTTTATTTCTTGCCAGGTTTATTATCTCTCCCAAAGTGCATCCTTGGACTTCTTCCCTGCATGAATGGTCAGGTTACAAACCATTTGAGTTGAAAGATTGTGTTCTCACTTTGCATGACTTGTATTTTTCAAGAAAGGCAGCATCCTTCCGATCTGTTAGGGATAAATATAAACAGTGCAAGTTCAAGTGTGTGGCAAACCTGTCCTCTCCTCCACATGTACCAAGTTATTACTTTGAAGATTGA 1008 0.3919 METRAGRKRKEAVVVVEKQHPKMHRVVLGELPNLPNLIVPENQNLSKQKVPCLKNPNIKKLSSPQIDPHYVSDINEYLRAMETKRRPIVNYMDKVQLVVTTNMRQILVDWLVDVAVEYKLLSETLHLCVSYIDRFLSVSPVTKSKLQLVGVSSMLLASKYEETKPPRVDKFCSITDNTFEKEEVVRMEAEILKSLNFEMGNPTAITFLKRFLSVASVNQKTPNLKIEFLSFYLAELSLLDYGCIRFLPSIIAASALFLARFIISPKVHPWTSSLHEWSGYKPFELKDCVLTLHDLYFSRKAASFRSVRDKYKQCKFKCVANLSSPPHVPSYYFED 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03418 335 ProSitePatterns Cyclins signature. 104 135 IPR006671 -
Viun9g03418 335 FunFam G2/mitotic-specific cyclin 87 198 - -
Viun9g03418 335 SMART Cyclin_C_2 202 325 IPR004367 -
Viun9g03418 335 SMART cyclin_7 109 193 IPR013763 -
Viun9g03418 335 SMART cyclin_7 206 294 IPR013763 -
Viun9g03418 335 Pfam Cyclin, C-terminal domain 202 324 IPR004367 -
Viun9g03418 335 SUPERFAMILY Cyclin-like 63 199 IPR036915 -
Viun9g03418 335 SUPERFAMILY Cyclin-like 202 326 IPR036915 -
Viun9g03418 335 Gene3D - 73 321 - -
Viun9g03418 335 PANTHER CYCLINS 57 318 IPR039361 -
Viun9g03418 335 Gene3D - 87 200 - -
Viun9g03418 335 Pfam Cyclin, N-terminal domain 73 199 IPR006671 -
Viun9g03418 335 FunFam Cyclin superfamily protein, putative 199 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03418 Viun-Chr9 40476777 40479069 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03418 3 335 Core Cell Cycle Gene Families AT5G43080 54.094 4.21e-126 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03418 K06627 - gmx:100786875 501.516