Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03417 ATGGAGACTCGTGCTGGGAGAAAGAGAAAAGAAGCTGTTGTGGTGGTGGAAAAACAGCACCCCAAAATGCATAGGGTTGTATTGGGTGAACTTCCCAATCTACCAAACCTTATTGTCCCCGAAAATCAAAATCTGTCCAAACAGAAAGTTCCATGTTTGAAAAATCCCAACATCAAGAAACTATCTTCTCCTCAGATAGACCCCCATTATGTGTCTGACATCAATGAATATCTTCGTGCAATGGAGACCAAAAGAAGACCAATAGTTAACTACATGGACAAAGTTCAATTGGTTGTTACCACAAACATGAGACAAATATTGGTGGATTGGTTAGTAGATGTTGCTGTGGAGTATAAGCTTCTCTCTGAAACTCTTCATCTATGTGTGTCATATATAGATAGGTTTTTATCGGTCAGTCCTGTGACAAAATCGAAGCTTCAATTAGTAGGTGTTTCTTCCATGCTTCTTGCCTCGAAGTACGAGGAAACTAAACCACCCAGGGTGGACAAATTTTGCAGCATAACTGATAACACTTTTGAAAAGGAAGAGGTTGTAAGGATGGAAGCTGAAATACTTAAGTCTCTGAACTTTGAAATGGGCAATCCTACTGCAATCACTTTTCTAAAATTTTTGAGTGTTGCTTCTGTGAACCAAAAAACACCAAATTTGAAGATTGAGTTTCTGAGTTTCTACCTTGCTGAGCTGAGTTTGTTGGATTATGGTTGTATAAGATTCTTGCCTTCCATTATAGCTGCATCTGCTTTATTTCTTGCCAGGTTTATTATCTCTCCCAAAGTGCATCCTTGGACTTCTTCCCTGCATGAATGGTCAGGTTACAAACCATTTGAGTTGAAAGATTGTGTTCTCACTTTGCATGACTTGTATTTTTCAAGAAAGGCAGCATCCTTCCGATCTGTTAGGGATAAATATAAACAGTGCAAGTTCAAGTGTGTGGCAAACCTGTCCTCTCCTCCACATGTACCAAGTTATTACTTTGAAGATTGA 1005 0.391 METRAGRKRKEAVVVVEKQHPKMHRVVLGELPNLPNLIVPENQNLSKQKVPCLKNPNIKKLSSPQIDPHYVSDINEYLRAMETKRRPIVNYMDKVQLVVTTNMRQILVDWLVDVAVEYKLLSETLHLCVSYIDRFLSVSPVTKSKLQLVGVSSMLLASKYEETKPPRVDKFCSITDNTFEKEEVVRMEAEILKSLNFEMGNPTAITFLKFLSVASVNQKTPNLKIEFLSFYLAELSLLDYGCIRFLPSIIAASALFLARFIISPKVHPWTSSLHEWSGYKPFELKDCVLTLHDLYFSRKAASFRSVRDKYKQCKFKCVANLSSPPHVPSYYFED 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03417 334 ProSitePatterns Cyclins signature. 104 135 IPR006671 -
Viun9g03417 334 FunFam G2/mitotic-specific cyclin 87 198 - -
Viun9g03417 334 Gene3D - 73 320 - -
Viun9g03417 334 Pfam Cyclin, N-terminal domain 73 199 IPR006671 -
Viun9g03417 334 SMART cyclin_7 209 293 IPR013763 -
Viun9g03417 334 SMART cyclin_7 109 193 IPR013763 -
Viun9g03417 334 SMART Cyclin_C_2 202 324 IPR004367 -
Viun9g03417 334 SUPERFAMILY Cyclin-like 63 199 IPR036915 -
Viun9g03417 334 SUPERFAMILY Cyclin-like 202 325 IPR036915 -
Viun9g03417 334 Gene3D - 87 200 - -
Viun9g03417 334 Pfam Cyclin, C-terminal domain 202 323 IPR004367 -
Viun9g03417 334 PANTHER CYCLINS 57 317 IPR039361 -
Viun9g03417 334 FunFam Cyclin superfamily protein, putative 199 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03417 Viun-Chr9 40476776 40479069 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03417 3 334 Core Cell Cycle Gene Families AT5G43080 53.801 2.04e-123 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03417 K06627 - gmx:100786875 494.967