Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03416 ATGGAAACTCGTGCAGAAAAGAGAAAGTCAAATGTCATGGCCTCAGTTGTGGTGCAGAGACAACATCCCAAGAAGCAACGCGTTTGCTTCACTCAACCTTCCAATCTACCAAACTTTGCCGAAACTTCTAGTCTTTGCGAAGAGAAACTGCAATCTCTGTGGAATAATGTCAACCTTAAAAGATCAAATTCCAGGAACAACTTTCTTCCTTCCTCCCAAATTCATGAACTTGATGTTTGGGACATCAACGAGTATCTTCGTGCCTTGGAGATAAAGAGAAGACCAATGGTTAACTATATTCAGAAAGTTCAAAGAACAATTACCTCCAACATGAGAGCAGTATTAATGGATTGGAAGTATGAGGAAGTTGATCCACCCAGTTTGAATGAGTTCTGTAACGTCACTGATAACACCTGTAATAAGACAGAGATTATAAAGATGGAGGCTGAAATACTCAAGACTTTGAATTTTGAGATGGAAAATCCTACTGCAATCACTTTTTTGAGGTTTTTTTCTTGGGCTGCTTCTGATAATCAAAGAACTCCAAATTTGAAGGTTGAATTTTTGGGCTGGTATTTTGTTGAGCTGAGTTTGTTGGATTATGATTGTATAAGATTCTTGCCGTCTGTTGTAGCAGCATCTGCTTTATTTCTAGCCAGATTTTTGATTGATCCTGAAGTGCATCCTTGGACTTCTTCCTTGTTTGAATGTTCGGGTTACAAACCAGTTGAATTGAAAGAGTGTGTTCTCATCTTGCATAATTTGCATTTGTCAAGAAAGGCAGAATCTTTCGAAGCTGTTAGGGAGAAATACAAGCAGCACAAATTCAAATACGTGGCAAATTTACCTTCTCCTTCATATGTACCAAGTTACTACTTTGAAGACCAGTTGCATATGAATGATCAGCAAACGTTATGTACGATTGACAATGTACATTCCACTCCATGA 948 0.3829 METRAEKRKSNVMASVVVQRQHPKKQRVCFTQPSNLPNFAETSSLCEEKLQSLWNNVNLKRSNSRNNFLPSSQIHELDVWDINEYLRALEIKRRPMVNYIQKVQRTITSNMRAVLMDWKYEEVDPPSLNEFCNVTDNTCNKTEIIKMEAEILKTLNFEMENPTAITFLRFFSWAASDNQRTPNLKVEFLGWYFVELSLLDYDCIRFLPSVVAASALFLARFLIDPEVHPWTSSLFECSGYKPVELKECVLILHNLHLSRKAESFEAVREKYKQHKFKYVANLPSPSYVPSYYFEDQLHMNDQQTLCTIDNVHSTP 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03416 315 PANTHER CYCLINS 119 273 IPR039361 -
Viun9g03416 315 SUPERFAMILY Cyclin-like 162 287 IPR036915 -
Viun9g03416 315 FunFam Cyclin A1 149 281 - -
Viun9g03416 315 SUPERFAMILY Cyclin-like 74 159 IPR036915 -
Viun9g03416 315 Pfam Cyclin, N-terminal domain 119 159 IPR006671 -
Viun9g03416 315 Gene3D - 155 288 - -
Viun9g03416 315 SMART Cyclin_C_2 162 285 IPR004367 -
Viun9g03416 315 Gene3D - 81 94 - -
Viun9g03416 315 Gene3D - 115 154 - -
Viun9g03416 315 Gene3D - 95 114 - -
Viun9g03416 315 Pfam Cyclin, C-terminal domain 162 284 IPR004367 -
Viun9g03416 315 SMART cyclin_7 166 254 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03416 Viun-Chr9 40473280 40475595 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03416 1 295 Core Cell Cycle Gene Families AT5G43080 39.535 2.96e-76 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03416 K06627 - gmx:100787417 360.533