Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03415 ATGGAAACTCGTGCAGAAAAGAGAAAGTCAAATGTCATGGCCTCAGTTGTGGTGCAGAGACAACATCCCAAGAAGCAACGCGTTTGCTTCACTCAACCTTCCAATCTACCAAACTTTGCCGAAACTTCTAGTCTTTGCGAAGAGAAACTGCAATCTCTGTGGAATAATGTCAACCTTAAAAGATCAAATTCCAGGAACAACTTTCTTCCTTCCTCCCAAATTCATGAACTTGATGTTTGGGACATCAACGAGTATCTTCGTGCCTTGGAGATAAAGAGAAGACCAATGGTTAACTATATTCAGAAAGTTCAAAGAACAATTACCTCCAACATGAGAGCAGTATTAATGGATTGGTTAGTAGAACTTGCCGAGCAGCACAATCTTCTCTCGGATACTCTTCTGCTCTGTGTGTCATACATTGATAGGAAGTATGAGGAAGTTGATCCACCCAGTTTGAATGAGTTCTGTAACGTCACTGATAACACCTGTAATAAGACAGAGATTATAAAGATGGAGGCTGAAATACTCAAGACTTTGAATTTTGAGATGGAAAATCCTACTGCAATCACTTTTTTGAGGTTTTTTTCTTGGGCTGCTTCTGATAATCAAAGAACTCCAAATTTGAAGGTTGAATTTTTGGGCTGGTATTTTGTTGAGCTGAGTTTGTTGGATTATGATTGTATAAGATTCTTGCCGTCTGTTGTAGCAGCATCTGCTTTATTTCTAGCCAGATTTTTGATTGATCCTGAAGTGCATCCTTGGTTCAAATACGTGGCAAATTTACCTTCTCCTTCATATGTACCAAGTTACTACTTTGAAGACCAGTTGCATATGAATGATCAGCAAACGTTATGTACGATTGACAATGTACATTCCACTCCATGA 885 0.3887 METRAEKRKSNVMASVVVQRQHPKKQRVCFTQPSNLPNFAETSSLCEEKLQSLWNNVNLKRSNSRNNFLPSSQIHELDVWDINEYLRALEIKRRPMVNYIQKVQRTITSNMRAVLMDWLVELAEQHNLLSDTLLLCVSYIDRKYEEVDPPSLNEFCNVTDNTCNKTEIIKMEAEILKTLNFEMENPTAITFLRFFSWAASDNQRTPNLKVEFLGWYFVELSLLDYDCIRFLPSVVAASALFLARFLIDPEVHPWFKYVANLPSPSYVPSYYFEDQLHMNDQQTLCTIDNVHSTP 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03415 294 FunFam Cyclin superfamily protein, putative 181 255 - -
Viun9g03415 294 Gene3D - 143 178 - -
Viun9g03415 294 PANTHER CYCLINS 143 247 IPR039361 -
Viun9g03415 294 Gene3D - 179 275 - -
Viun9g03415 294 SUPERFAMILY Cyclin-like 186 258 IPR036915 -
Viun9g03415 294 SUPERFAMILY Cyclin-like 74 183 IPR036915 -
Viun9g03415 294 Gene3D - 81 94 - -
Viun9g03415 294 Pfam Cyclin, N-terminal domain 143 183 IPR006671 -
Viun9g03415 294 Pfam Cyclin, N-terminal domain 81 142 IPR006671 -
Viun9g03415 294 SMART cyclin_7 117 177 IPR013763 -
Viun9g03415 294 SMART cyclin_7 190 278 IPR013763 -
Viun9g03415 294 Gene3D - 95 142 - -
Viun9g03415 294 SMART Cyclin_C_2 186 294 IPR004367 -
Viun9g03415 294 Pfam Cyclin, C-terminal domain 186 254 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03415 Viun-Chr9 40473280 40475595 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03415 1 254 Core Cell Cycle Gene Families AT5G43080 43.011 6.15e-68 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03415 K06627 - gmx:100787417 306.99