Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03412 ATGGAGACGCGTGCAGCTGCAAAGAGAAAGGCAACCGCTGCTGCTCCCATGGTAGTGGTCGAAAAACAACATCCCAAAAGGCAGCGTGTTGTGCTGGGTGAACTTTCAAATCTTCCGACTGCAACTCAAAATCAACGCAAACAGAAACTGCAATGTAGGAAGAATCCGAATTTGAAGAAACCATCTCCCACAGAGTCCATTCCCTCTTCTTCCCAGATTGATCAACCTTATGTTTCCGACATCTATGAGTATCTTCATGATATGGAGATGCAGAGGAAGAGGAGACCAATGGTTGATTACATTGAAAAAGTTCAGAGAGAAGTTACTGTAATCATGAGGGCAATATTGGTGGATTGGCTAGTGGAGGTAGCTGAAGAGTACAAGCTTCACTCCGATACCCTTCATCTCTCTGTTTCATACATAGATAGATTTTTATCAGTGAATCCTGTTAGCAAGTCAAAACTTCAATTACTGGGTGTTTCTTCCATGCTAATTGCTGCAAAGTACGAGGAAGTTGACCCACCGCGTGTTGTTGCTTTTTGCAACATTACTGATAACACATACCACAAGAAAGAGGTTGTAAAGATGGAAGCTGACATACTCAAGTCTCTAAAGTTTGAGATGGGAAATCCTACTGTGAATACCTTTCTAAGGAGGTTTATTAATGTTGCTTGTGATAACCAAAAGGCTTCAAATTTACAGTTTGAATTTCTAAGCTGCTATCTTGCAGACCTAAGTTTGTTGGACTATGATTGCTTGAAAATTTTGCCTTCCATTGTGGCAGCTTCAGCTGTATTTCTTGCCAGGTTTATCATTGCTCCTGAAGTCCATCCTTGGAGTTCTTCATTGTCTGGATGTTCTGGTTACCAACCAGTTGAACTGAAAGAGTGTGTCCTCATCTTGCATGACTTGTATTTTTCAAGAAAGGCAGCGTCTTTCAAAGCTGTTAGGGAGAAATACAAGCACCACAAGTTCAAGTTTGTAGCAAGATTGCCTTCTCCTCCGCATATACCAAGACATTACTTTGAAACTCAGTGA 1038 0.4133 METRAAAKRKATAAAPMVVVEKQHPKRQRVVLGELSNLPTATQNQRKQKLQCRKNPNLKKPSPTESIPSSSQIDQPYVSDIYEYLHDMEMQRKRRPMVDYIEKVQREVTVIMRAILVDWLVEVAEEYKLHSDTLHLSVSYIDRFLSVNPVSKSKLQLLGVSSMLIAAKYEEVDPPRVVAFCNITDNTYHKKEVVKMEADILKSLKFEMGNPTVNTFLRRFINVACDNQKASNLQFEFLSCYLADLSLLDYDCLKILPSIVAASAVFLARFIIAPEVHPWSSSLSGCSGYQPVELKECVLILHDLYFSRKAASFKAVREKYKHHKFKFVARLPSPPHIPRHYFETQ 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03412 345 MobiDBLite consensus disorder prediction 35 72 - -
Viun9g03412 345 MobiDBLite consensus disorder prediction 1 20 - -
Viun9g03412 345 SMART cyclin_7 118 202 IPR013763 -
Viun9g03412 345 SMART cyclin_7 215 303 IPR013763 -
Viun9g03412 345 FunFam G2/mitotic-specific cyclin 96 207 - -
Viun9g03412 345 SUPERFAMILY Cyclin-like 211 336 IPR036915 -
Viun9g03412 345 PANTHER CYCLINS 59 322 IPR039361 -
Viun9g03412 345 Pfam Cyclin, N-terminal domain 80 208 IPR006671 -
Viun9g03412 345 SUPERFAMILY Cyclin-like 73 208 IPR036915 -
Viun9g03412 345 Pfam Cyclin, C-terminal domain 211 333 IPR004367 -
Viun9g03412 345 Gene3D - 80 330 - -
Viun9g03412 345 ProSitePatterns Cyclins signature. 113 144 IPR006671 -
Viun9g03412 345 SMART Cyclin_C_2 211 334 IPR004367 -
Viun9g03412 345 MobiDBLite consensus disorder prediction 30 72 - -
Viun9g03412 345 FunFam Cyclin superfamily protein, putative 208 280 - -
Viun9g03412 345 CDD CYCLIN_AtCycA-like_rpt2 211 325 - -
Viun9g03412 345 PIRSF Cyclin_A_B_D_E 1 341 IPR046965 GO:0016538|GO:0044772
Viun9g03412 345 Gene3D - 94 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03412 Viun-Chr9 40469374 40471997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03412 3 343 Core Cell Cycle Gene Families AT1G47210 53.297 5.30e-130 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03412 K06627 - gmx:100787417 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03412 9 40469374 40471997 Viun9g03412 9 40469374 40471997 ECH