Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03406 ATGAGTGCTCCGTCGCGAGAAGATGGGTCGAAAGAAGAGGAGAAGGACGAGGAGGCGAACCGGCTTCTAGAGGAAGCAGGAGCGGTATCGTCATCATCGGAAGAAGATGTGGCATACGAAGCGGGGGAGAAGATCCTGGTGGCGGATTTCGAGTTTGACACAGTGGACGATGCGACTGTTCCTCCTTTCTCATGGAAGAAGCTGTGGCTCTTCACTGGGCCTGGGTTCTTGATGAGCATAGCTTTTTTGGATCCGGGGAATCTCGAGGGGGATCTCCAGTCTGGGGCCATCGCGGGCTACTCGCTCCTCTGGCTCTTGATGTGGGCCACCGTCATGGGCCTCTTGATCCAGCTTCTGTCCGCCAGGGTCGGGGTCGCCACGGGCCGCCACCTCGCCGAGCTCTGCAGGGATGAGTATCCCCATTGGGCCCGTCTTGTGCTCTGGTTCATGGCCGAGCTGGCCCTGATTGGCGCCGACATTCAAGAGGTCATTGGAAGTGCCATCGCCATCCAAATTCTTAGCCGAGGCGTCCTCCCTCTCTGGGTTGGAGTTCTAATCACTGCTTCCGACTGCTTTTTCTTTCTATTTCTCGAGAACTATGGAGTGAGGAAGTTGGAAGCTGCTTTTGCAGTTCTCATTTCTGTTATGGGTCTTTCTTTTGCCTGGATGTTTGCTGATGCAAGACCTAATAGAGAAGAGCTTTTAATGGGTATTTTGGTTCCGAGACTAAGCTCAAAAACAATTCGTCAAGCTGTGGGTGTTGTGGGTTGTGTCATCATGCCTCACAATGTATTCCTGCATTCTGCTTTGGTTCAATCAAGGAAGGTTGATCCTAATAAGAAAGGTCGGGTACAGGAGGCTCTCAACTACTATTCAATCGAGTCATCAGCTGCACTTTCAGTCTCCTTCATGATCAATCTATTTGTCACAACAGTTTTTGCTAAAGGTTTTTATGGAACAAAGCAGGCAAAAAACATAGGACTGGTCAATGCAGGGCAATATCTTGAAGAAAAGTATGGAGGAGGAGTTTTCCCTATTCTTTATATATGGGGAATTGGGTTATTGGCAGCTGGCCAGAGCAGCACCATCACTGGCACATACGCTGGCCAATTCATAATGGGGGGTTTCCTCAACCTTCGTTTAAAGAAATGGATGAGAGCATTGATCACTCGAAGTTTTGCAATTGTGCCAACTATAATTGTAGCTATAGTTTTTAATAGATCAGAAGCCTCTTTGGACATTTTGAATGAATGGCTCAATGTGCTTCAGTCCATGCAAATTCCCTTTGCTTTGATTCCCCTCCTCACATTGGTCTCCAAAGAGCAGCTCATGGGAACCTTTAGAGTTGGACCTGTTCTTGAGAGAGTAGCATGGACTGTTGCTGGACTGATAATAGTGATTAATGGGTATCTATTGTTAGATTTCTTCATTTCTGAGGTGAATGGCGTCATGCTTGGTCTTTTAGCCTGCTCCTGCACGACAGCCTATATTGCGTTCATAGTATATTTGGTTTCTCAGAGCGGTATTCTTCCTTCTGCATGGGTTAATCGTCTTCCCAAGGGATTTTCTTCAACTGGGAATTAA 1584 0.476 MSAPSREDGSKEEEKDEEANRLLEEAGAVSSSSEEDVAYEAGEKILVADFEFDTVDDATVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATVMGLLIQLLSARVGVATGRHLAELCRDEYPHWARLVLWFMAELALIGADIQEVIGSAIAIQILSRGVLPLWVGVLITASDCFFFLFLENYGVRKLEAAFAVLISVMGLSFAWMFADARPNREELLMGILVPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRKVDPNKKGRVQEALNYYSIESSAALSVSFMINLFVTTVFAKGFYGTKQAKNIGLVNAGQYLEEKYGGGVFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSFAIVPTIIVAIVFNRSEASLDILNEWLNVLQSMQIPFALIPLLTLVSKEQLMGTFRVGPVLERVAWTVAGLIIVINGYLLLDFFISEVNGVMLGLLACSCTTAYIAFIVYLVSQSGILPSAWVNRLPKGFSSTGN 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03406 527 NCBIfam Nramp family divalent metal transporter 73 443 - -
Viun9g03406 527 Hamap Divalent metal cation transporter MntH [mntH]. 54 476 IPR001046 GO:0016020|GO:0030001|GO:0046873
Viun9g03406 527 MobiDBLite consensus disorder prediction 1 23 - -
Viun9g03406 527 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 66 444 IPR001046 GO:0016020|GO:0030001|GO:0046873
Viun9g03406 527 PRINTS Natural resistance-associated macrophage protein signature 386 403 IPR001046 GO:0016020|GO:0030001|GO:0046873
Viun9g03406 527 PRINTS Natural resistance-associated macrophage protein signature 177 196 IPR001046 GO:0016020|GO:0030001|GO:0046873
Viun9g03406 527 PRINTS Natural resistance-associated macrophage protein signature 202 223 IPR001046 GO:0016020|GO:0030001|GO:0046873
Viun9g03406 527 PRINTS Natural resistance-associated macrophage protein signature 251 274 IPR001046 GO:0016020|GO:0030001|GO:0046873
Viun9g03406 527 PRINTS Natural resistance-associated macrophage protein signature 420 439 IPR001046 GO:0016020|GO:0030001|GO:0046873
Viun9g03406 527 PRINTS Natural resistance-associated macrophage protein signature 147 173 IPR001046 GO:0016020|GO:0030001|GO:0046873
Viun9g03406 527 PRINTS Natural resistance-associated macrophage protein signature 358 377 IPR001046 GO:0016020|GO:0030001|GO:0046873
Viun9g03406 527 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 31 505 IPR001046 GO:0016020|GO:0030001|GO:0046873
Viun9g03406 527 Pfam Natural resistance-associated macrophage protein 89 450 IPR001046 GO:0016020|GO:0030001|GO:0046873
Viun9g03406 527 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03406 Viun-Chr9 40453237 40457156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03406 12 507 Inorganic Solute Cotransporters AT1G47240 79.317 0.0 812
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03406 K21398 - gmx:100791117 935.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03406 9 40453237 40457156 Viun9g03406 9 40453237 40457156 ECH