Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03394 ATGCGGGTTGTGTGTTGCTCCATTTCGTGGTCGTTTGGGTCAGCCGTCACTGCTGCTCTCCCCTCTTTCCCTTCTCCCAGATTCCCTCTCTCACTCCCCTCTTCCAACTCTCCGGCCACCGTCCTCCGCCGTTCCACTCCTCCACCTAGACGAGTGACCAGAATGGCTCTGAAAAACGCTAAAGATGAACAAGACCCGCGCTTGGAGAGAATCTCCTCTGCAATCCGAGTCATCCCTGACTTTCCCAAGCCAGGAATTTTGTTTCAGGACATAACAACGCTGCTTCTTGATCCCAAGGCTTTCAAAGACACCATCGATCTTTTTGTTGAGAGGTACAGAGATCAAAATATCAATGTTGTCGCAGGTGTTGAAGCAAGAGGTTTTATATTTGGTCCACCCATTGCATTAGCTATTGGGGCAAAATTTGTCCCCATGAGGAAACCCAATAAATTGCCAGGGGAGGTTATATCAGAAGAGTATTCATTGGAGTATGGAAAAGACAAAATTGAGATGCATGTAGGGGCTGTACTACCTGGAGAACGGGCCTTAGTCATAGATGATCTTATTGCCACCGGGGGAACGTTAGATGCTGCAATCAAGCTACTAGAACGTGTTGGGGTTGATGTTGTGGAGTGTGCTTGTCTGATTGAATTACCAGAGCTGAAGGGGCGGGATAGGCTGGGAAACAAGCCGCTATTTGTCTTAGTTAAAGTGACGGCATGA 723 0.4813 MRVVCCSISWSFGSAVTAALPSFPSPRFPLSLPSSNSPATVLRRSTPPPRRVTRMALKNAKDEQDPRLERISSAIRVIPDFPKPGILFQDITTLLLDPKAFKDTIDLFVERYRDQNINVVAGVEARGFIFGPPIALAIGAKFVPMRKPNKLPGEVISEEYSLEYGKDKIEMHVGAVLPGERALVIDDLIATGGTLDAAIKLLERVGVDVVECACLIELPELKGRDRLGNKPLFVLVKVTA 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03394 240 FunFam Adenine phosphoribosyltransferase 1 59 238 - -
Viun9g03394 240 NCBIfam adenine phosphoribosyltransferase 72 237 IPR005764 GO:0003999|GO:0005737|GO:0006168
Viun9g03394 240 CDD PRTases_typeI 105 237 IPR000836 -
Viun9g03394 240 Pfam Phosphoribosyl transferase domain 98 226 IPR000836 -
Viun9g03394 240 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 59 237 - -
Viun9g03394 240 Hamap Adenine phosphoribosyltransferase [apt]. 71 238 IPR005764 GO:0003999|GO:0005737|GO:0006168
Viun9g03394 240 Gene3D - 58 239 IPR029057 -
Viun9g03394 240 SUPERFAMILY PRTase-like 73 237 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03394 Viun-Chr9 40359792 40364492 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03394 61 240 PRT Gene Family AT1G27450 80.000 3.45e-104 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03394 K00759 - gmx:100777103 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03394 9 40359792 40364492 Viun9g03394 9 40359792 40364492 ECH