Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03361 ATGGAGGACGCGTTTGCCAGATCTATTCCCGAGGTCCTCGATTTCTTCGGAGTGAACCCGACTAAGGGTTTATCTGATGCTGAGGTAGTACAACATGCTAGACTTTATGGGAATAACGTGCTGCCTGAAGATCAAAGAGCTCCTTTTTGGAAATTGGTTTTGAAGCAATTTGATGATTTGCTTGTAAAGATACTAATTGCAGCAGCTCTTATATCTTTTATTCTGGCTTTAGTTAATGGAGAAACAGGCTTGATGGCATTTCTGGAGCCTTCCGTTATTCTGATGATATTGGCAGCAAATGCAGCAGTTGGAGTGATTACAGAATCAAACGCTGAAAAAGCTCTAGAGGAGCTGCGTGCCTATCAAGCTGATGTGGCAACTGTCTTGCGCAATGGTTGTTTTTCCATACTTCCTGCAACCGAACTTGTTCCTGGGGATATTGTGGAGGTTTCTGTGGGCTGCAAAATTCCTGCTGATATGAGGATGATTGAGATGCTAAGTAATCAAGTGCGTGTTGATCAAGCTATTCTTACAGGTGAGAGCAGCTCCGTGGAGAAAGAGCTGAAAATAACCACAACTTCAAATGCTGTATACCAAGACAAAACAAATATTCTGTTCTCGGGTACGGTTGTAGTTGCTGGTAGGGCGAGAGCTGTTGTGGTGGGAGTTGGTCCTAATACGGCCATGGGCAGCATACGAGATTCAATGTTGCGAACAGAGGATGAGGCAACACCATTGAAAAAGAAGCTGGACGAGTTTGGGACCTTTTTGGCCAAGGTTATAGCAGGGATTTGTGTTTTGGTGTGGATTGTAAATATTGGTCACTTCCGTGACCCTTCTCACGGTGGTTTCTTGAGTGGTGCAATTCATTATTTTAAGATTGCAGTTGCTCTGGCAGTTGCAGCAATTCCAGAAGGGCTGCCTGCAGTTGTGACAACGTGTTTGGCTCTTGGGACAAAGCGTATGGCTAGGTTGAATGCCATTGTTCGCTCCTTGCCATCGGTCGAGACATTGGGTTGCACAACTGTTATTTGCAGTGACAAAACTGGGACGCTAACTACTAACATAATGTCAGTTGCGAAGGTTCAGGATGATACAAAATTGTTATTCACGTTGCTTTCCAATGTATGTGTTGTTGAATCTGCAAATCGTGGCCCTGTTGTTTCTGAATACAGTGTCAGTGGAACAACATATGCACCTGAAGGAATAATATTTGACAGTACAGGGATGCAGCTTGACTTTCCTGCTGAATTGCCTTGTCTTCTTCACATGGCAATGTGTTCTGCTCTTTGCAATGAATCAACCCTGCAGTATAATCCTGATAAAGGGAATTATGAAAAAATTGGTGAGTCAACTGAAGTGGCACTACGTGTCTTGGCAGAAAAGGTTGGTCTCCCTGGTTTCAATTCCATGCCATCAGCCTTGAATATGTTGACTAAGCATGAACGTGCTTCTTACTGTAACCATTATTGGGAGGAACAATTTAGAAAGATACATGTTTTGGAGTTTTCTCGAGATCGGAAAATGATGAGTGTGCTTTGCAGCCGGAACCAGATGCATATTTTGTTCTCAAAAGGTGCCCCAGAAAGTATAATATCTAGATGTTCAACCATTCTGTGCAACAGTGATGGTTCTATTGTGCCACTTACTGCTGATATTCGAGCAGAGCTCGACTCAAGATTCAACAGTTTTGCAGGAAAAGAAACATTAAGATGCCTTGCTTTGGCCCTGAAATGGATGCCCTCAATTCAACAGTCATTGTCCTTTGATGATGAGAAGGATCTTACATTTATTGGGTTGGTTGGGATGCTGGATCCTCCACGAGATGAAGTAAGAAATGCAATGCTTTCGTGTATGACTGCTGGCATCCGTGTTATTGTCGTCACTGGGGATAACAAGTCCACTGCTGAGTCACTTTGCCGCAAGATAGGTGCTTTTGACCAATTGATAGATTTTTCTGAACATTCTTACACTGCTTCTGAGTTTGAAGAACTTCCACCACTGCAGCAAACTATAGCATTGCAACGTATGGCACTTTTTACTAGGGTTGAGCCTTCTCATAAAAGGATCCTGGTAGAAGCATTGCAGCACCAGAATGAAGTGGTTGCAATGACGGGTGATGGAGTTAATGATGCACCAGCACTAAAGAAGGCGGATATAGGAATTGCTATGGGTTCAGGAACAGCTGTTGCCAAGAGTGCTTCAGACATGGTGCTCGCTGATGACAACTTTGCCTCTATTGTTGCGGCTGTGGCAGAGGGAAGGGCTATATACAATAATACAAAACAGTTTATTCGATACATGATTTCTTCCAATATTGGCGAAGTAGTTTGTATATTTGTGGCTGCAGTGCTTGGAATACCGGATACCCTTGCCCCTGTCCAATTGCTTTGGGTCAATTTGGTTACTGACGGATTACCTGCCACTGCTATTGGCTTCAATAAACAAGACTCTGATGTGATGAGGGCTAAGCCTCGAAAGGTGAATGAAGCCGTTGTTTCTGGTTGGCTCTTCTTTCGCTATTTGGTAATAGGAGCTTATGTTGGCCTTGCTACTGTTGCTGGTTTTATTTGGTGGTTTGTTTATTCTGATGGTGGCCCTAAACTTCCATACACAGAATTGATGAATTTTGATACCTGCCCAACCAGGGAGACAACTTATCCATGCAGTATATTTGATGATCGACATCCGTCTACTGTATCAATGACTGTGCTTGTCGTTGTTGAGATGTTCAATGCTTTGAACAATCTCAGTGAAAATCAATCTCTTCTGGTTATCCCTCCATGGAGTAACATGTGGCTTGTTGCTTCTATAATCATAACTATGCTTCTTCACATACTAATCTTATATGTTCACCCACTATCGATTCTTTTCTCTGTAACACCCTTATCTTGGGCTGACTGGACAGTTGTCCTCTATCTTTCGTTACCTGTTATAGTCATTGATGAGGTGTTGAAGTTCTTCTCCAGAAATCCCGTCGGTTTTAGATTCAGATTATGGTTCAGGAGGTCTGATTTACTTCCAAAAAAAGATTTACATGAAAAGTAA 3048 0.4272 MEDAFARSIPEVLDFFGVNPTKGLSDAEVVQHARLYGNNVLPEDQRAPFWKLVLKQFDDLLVKILIAAALISFILALVNGETGLMAFLEPSVILMILAANAAVGVITESNAEKALEELRAYQADVATVLRNGCFSILPATELVPGDIVEVSVGCKIPADMRMIEMLSNQVRVDQAILTGESSSVEKELKITTTSNAVYQDKTNILFSGTVVVAGRARAVVVGVGPNTAMGSIRDSMLRTEDEATPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLSGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNIMSVAKVQDDTKLLFTLLSNVCVVESANRGPVVSEYSVSGTTYAPEGIIFDSTGMQLDFPAELPCLLHMAMCSALCNESTLQYNPDKGNYEKIGESTEVALRVLAEKVGLPGFNSMPSALNMLTKHERASYCNHYWEEQFRKIHVLEFSRDRKMMSVLCSRNQMHILFSKGAPESIISRCSTILCNSDGSIVPLTADIRAELDSRFNSFAGKETLRCLALALKWMPSIQQSLSFDDEKDLTFIGLVGMLDPPRDEVRNAMLSCMTAGIRVIVVTGDNKSTAESLCRKIGAFDQLIDFSEHSYTASEFEELPPLQQTIALQRMALFTRVEPSHKRILVEALQHQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFASIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMRAKPRKVNEAVVSGWLFFRYLVIGAYVGLATVAGFIWWFVYSDGGPKLPYTELMNFDTCPTRETTYPCSIFDDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNMWLVASIIITMLLHILILYVHPLSILFSVTPLSWADWTVVLYLSLPVIVIDEVLKFFSRNPVGFRFRLWFRRSDLLPKKDLHEK 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03361 1015 NCBIfam HAD-IC family P-type ATPase 675 790 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun9g03361 1015 NCBIfam HAD-IC family P-type ATPase 92 368 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun9g03361 1015 SFLD Haloacid Dehalogenase 326 757 - -
Viun9g03361 1015 FunFam Calcium-transporting ATPase, putative 212 341 - -
Viun9g03361 1015 PANTHER CALCIUM-TRANSPORTING ATPASE 9 991 - -
Viun9g03361 1015 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 352 603 IPR023299 GO:0000166
Viun9g03361 1015 FunFam Sodium/potassium-transporting ATPase subunit alpha 598 744 - -
Viun9g03361 1015 SUPERFAMILY Calcium ATPase, transduction domain A 124 235 IPR008250 -
Viun9g03361 1015 FunFam Calcium-transporting ATPase 370 606 - -
Viun9g03361 1015 Pfam Cation transport ATPase (P-type) 429 538 - -
Viun9g03361 1015 Coils Coil 111 131 - -
Viun9g03361 1015 Pfam Cation transporter/ATPase, N-terminus 8 72 IPR004014 -
Viun9g03361 1015 SFLD p-type atpase 326 757 IPR044492 -
Viun9g03361 1015 Gene3D - 55 990 - -
Viun9g03361 1015 Gene3D - 355 606 IPR023299 GO:0000166
Viun9g03361 1015 PRINTS P-type cation-transporting ATPase superfamily signature 705 724 - -
Viun9g03361 1015 PRINTS P-type cation-transporting ATPase superfamily signature 728 740 - -
Viun9g03361 1015 PRINTS P-type cation-transporting ATPase superfamily signature 345 359 - -
Viun9g03361 1015 PRINTS P-type cation-transporting ATPase superfamily signature 621 631 - -
Viun9g03361 1015 PRINTS P-type cation-transporting ATPase superfamily signature 173 187 - -
Viun9g03361 1015 PRINTS P-type cation-transporting ATPase superfamily signature 599 610 - -
Viun9g03361 1015 FunFam Calcium-transporting ATPase 112 237 - -
Viun9g03361 1015 Pfam Cation transporting ATPase, C-terminus 789 988 IPR006068 -
Viun9g03361 1015 PRINTS H+-transporting ATPase (proton pump) signature 677 693 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun9g03361 1015 PRINTS H+-transporting ATPase (proton pump) signature 705 721 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun9g03361 1015 PRINTS H+-transporting ATPase (proton pump) signature 736 761 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun9g03361 1015 Pfam haloacid dehalogenase-like hydrolase 597 719 - -
Viun9g03361 1015 SUPERFAMILY HAD-like 592 753 IPR036412 -
Viun9g03361 1015 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 990 IPR023298 -
Viun9g03361 1015 CDD P-type_ATPase_SERCA 5 990 - -
Viun9g03361 1015 ProSitePatterns E1-E2 ATPases phosphorylation site. 347 353 IPR018303 -
Viun9g03361 1015 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 701 994 - -
Viun9g03361 1015 Pfam E1-E2 ATPase 122 324 - -
Viun9g03361 1015 Gene3D - 22 237 - -
Viun9g03361 1015 NCBIfam calcium-translocating P-type ATPase, SERCA-type 53 860 IPR005782 GO:0005388|GO:0006816|GO:0016020
Viun9g03361 1015 Gene3D - 342 749 IPR023214 -
Viun9g03361 1015 SMART Cation_ATPase_N_a_2 3 77 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03361 Viun-Chr9 40214831 40237031 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03361 1 1009 Primary Pumps ATPases(2) AT1G10130 83.251 0.0 1734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03361 K05853 - gmx:100783509 1869.36