Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03358 ATGGCGGTTATGGATTACAGAGGCCTTCTGCTTCTCCTTCTTCTCTTCCTTCTTTCATCAAACTTTGCAACGTCTCACTCCATAGTGCGCTTCCTTCCTGGCTTCCATGGACCCCTTCCTTTTCTACTTCAAACTGGGTATGTGGAAGTGGGAGAAAGTGAAGCAGAGGAGAGTGCAGAACTATTCTATTATTTTATTGAGTCGGAGAATGACCCCAAAGGGGACCCTCTTCTTCTTTGGCTAACTGGGGGACCAGGTTGCTCCGCTTTTTCTGGGTTAGTTTTTGAAATAGGTCCACTGTCTTTTGAAAACCAGGAATACAATGGGAGCTTACCTAATTTGAGACTGAAGCCACAATCATGGACAAAGGTAAGTAGCATCATATTTGTGGATCTGCCAGCGGGTACAGGCTTCTCTTATCCCAAAACAGAACTTGCTGTTAATCAAAATGTCTCCAAGCTAGTTCGCCATGCTCATCAATTTCTTAGGAAGTGGCTAATTGATCATCCGGAATTTCTCTCAAATGAGGTGTACATTGCTGGCGACTCATTCTGTGGCCTTCCTATTCCAGTTCTTGTTCAAGAAATTTCATATGGAAACGAAGGTGGTATCCAACCATGGATAAATCTCCAGGGATACATTCTGGGAAATCCCATAACAACATCCACTGAAAAAAACTACAAAATTCCGTTTAATCATGGCATGGCACTCATATCTGATGAACTCTACGAGTCACTGCAAAGGAATTGCAGAGGAGAGTATCGCAACATAGACCCCACAAACACATTTTGTGCAAGGGACATGCAATCCTACGAGGAGTCTATTTCAGGAATTCAAGTTGGGCATGTTTTGGAACCCCATTGTGAGGAATCTGCTCTGCGTAATCCAATTCAAGATACTTGGAGCAGCAGGAGGTCCCTTGCTCATGAATCCTATCCTCTCACAATGCCACCTTTATACTGTAGGACTCATGCATATGTCCTTTCTAGCTATTGGGCCAATGATGATAATGTCCGCAAAGCACTGCATATTCGTAAGGGAACTAAAGGGAAATGGAAGCGGTGTAACTATGACATACCTTTTAAGACTGATATCTCTAACAGCTTTCAATATCACGTCAATCTCAGCAGAAAAGGCTACCGTTCATTGATATACAGTGGGGATCATGACATGGTAGTTCCATTCCTATCTACACAAGCTTGGGTAAGAGCTTTAAACTATTCCATCGTCTCTGACTGGAGGCAGTGGTATTACAATGGCCAAGTGGCAGGATACACGAGAACTTACTCAAATCGGATGACATTTGCAACCGTGAAGGGTGGAGGGCACACAGCTCCGGAGTACAAACCTGAAGAATGTTTAGCCATGTTCATGAGATGGATATCTAATAAGCCACTCTGA 1401 0.4354 MAVMDYRGLLLLLLLFLLSSNFATSHSIVRFLPGFHGPLPFLLQTGYVEVGESEAEESAELFYYFIESENDPKGDPLLLWLTGGPGCSAFSGLVFEIGPLSFENQEYNGSLPNLRLKPQSWTKVSSIIFVDLPAGTGFSYPKTELAVNQNVSKLVRHAHQFLRKWLIDHPEFLSNEVYIAGDSFCGLPIPVLVQEISYGNEGGIQPWINLQGYILGNPITTSTEKNYKIPFNHGMALISDELYESLQRNCRGEYRNIDPTNTFCARDMQSYEESISGIQVGHVLEPHCEESALRNPIQDTWSSRRSLAHESYPLTMPPLYCRTHAYVLSSYWANDDNVRKALHIRKGTKGKWKRCNYDIPFKTDISNSFQYHVNLSRKGYRSLIYSGDHDMVVPFLSTQAWVRALNYSIVSDWRQWYYNGQVAGYTRTYSNRMTFATVKGGGHTAPEYKPEECLAMFMRWISNKPL 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03358 466 Gene3D alpha/beta hydrolase 23 297 IPR029058 -
Viun9g03358 466 Gene3D - 321 466 - -
Viun9g03358 466 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 27 450 IPR001563 GO:0004185|GO:0006508
Viun9g03358 466 FunFam Serine carboxypeptidase-like 11 23 466 - -
Viun9g03358 466 FunFam Carboxypeptidase 369 463 - -
Viun9g03358 466 FunFam Carboxypeptidase 320 465 - -
Viun9g03358 466 SUPERFAMILY alpha/beta-Hydrolases 29 465 IPR029058 -
Viun9g03358 466 Pfam Serine carboxypeptidase 33 463 IPR001563 GO:0004185|GO:0006508
Viun9g03358 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Viun9g03358 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 140 IPR001563 GO:0004185|GO:0006508
Viun9g03358 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 129 IPR001563 GO:0004185|GO:0006508
Viun9g03358 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 433 446 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03358 Viun-Chr9 40180721 40186116 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03358 23 57 Calmodulin-binding Proteins AT2G22960 57.143 3.99e-06 45.4