Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03348 ATGTTGCTCCACGAAGCGGTTCAGTTCCCATCTTCTCCGGTTCACCAAACCATGCTCACCCAAAGTGAAATAGAAGACCTGTTTTCTCTCATAAACAAATCCAGAGACCGGCCCAGCCTGGCATCCGGTTCGCAGGGATCGAACCGGACGGTTTACTCGTCCGAGGAAAGAAAGCTGAGACGCATGCAATCGAACCGGGAATCGGCCCGAAGGTCCCGCTACAGAAAGAAGAAGCATCTTGAGAACCTCTCGAGCCAACTGAACCGGTTGAGAATCCAAAACCGGTTTCTCAAAAACCGAGTCGCCTCGACCATGCACCAACACCTCCTTCTATCCCTACATAACGATCATCTTAAATCCGAAGCTATTGCGCTTATGGCCACTCTTTCGGATCTCTGTGGGATCTTATTTTAG 414 0.5024 MLLHEAVQFPSSPVHQTMLTQSEIEDLFSLINKSRDRPSLASGSQGSNRTVYSSEERKLRRMQSNRESARRSRYRKKKHLENLSSQLNRLRIQNRFLKNRVASTMHQHLLLSLHNDHLKSEAIALMATLSDLCGILF 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03348 137 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 60 75 IPR004827 GO:0003700|GO:0006355
Viun9g03348 137 MobiDBLite consensus disorder prediction 53 69 - -
Viun9g03348 137 Pfam Basic region leucine zipper 54 103 IPR004827 GO:0003700|GO:0006355
Viun9g03348 137 Coils Coil 80 100 - -
Viun9g03348 137 FunFam BZIP transcription factor 55 106 - -
Viun9g03348 137 Coils Coil 52 72 - -
Viun9g03348 137 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 55 102 IPR004827 GO:0003700|GO:0006355
Viun9g03348 137 CDD bZIP_plant_GBF1 58 108 IPR045314 GO:0003700|GO:0006355
Viun9g03348 137 Gene3D - 55 132 - -
Viun9g03348 137 SMART brlzneu 53 124 IPR004827 GO:0003700|GO:0006355
Viun9g03348 137 SUPERFAMILY Leucine zipper domain 57 111 IPR046347 GO:0003700|GO:0006355
Viun9g03348 137 MobiDBLite consensus disorder prediction 36 80 - -
Viun9g03348 137 MobiDBLite consensus disorder prediction 36 52 - -
Viun9g03348 137 PANTHER BZIP TRANSCRIPTION FACTOR 44 36 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03348 Viun-Chr9 40115884 40116297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03348 13 118 bZIP Transcription Factor Family AT3G49760 38.053 1.83e-16 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun9g03348 bZIP_2 2.8e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03348 - - gmx:102661984 219.164