Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03331 ATGGTCTTTGATATCTCCAACCCAGGGCTTCAACTAGGTCTTGGTCTTGGCCTCCATGATCAGTCACAAGAAACTTGCATGAAGAGCCATGAACGAAGGCGAAGACAAAGACAGAGCCAGAAAAAGAAGGAAGCGGATCCACGTAAGAACAAGACTCACCCATCACTTAGGTTAGGACCGCCCCATGATGATGATGCAAATAATAATCATCAAGTTACAAAGACTGATTCCGATGAATGTTGTGATGATTTTCACGGTCGTGCTTCTCCTCCGAGTGCAGTGTCTTCGTTTCTTAACTCATCAAGCATCATCAAGAGAGAGCGAGATCGTGAAGAAGTTGAGTTAGAGGTAGAGAAGTTTCCCTCAAACTTAAGAGTCGTGGATCTTCATGAATATGGTAATTACTCCAAGAAGAAGCTTAGACTCACCAAAGAACAATCTGCAGTCTTGGAAGATAGCTTCAAAGACCATTCTACTCTCACTCTGACACAGAAGCAAGAATTGGCAAAGAAACTGAATCTGCGGGCGAGACAAGTGGAGGTATGGTTTCAGAACAGAAGAGCGAGGACAAAACTGAAGCAAACGGAAATGAACTGTGAGATACTGAAAAAGTGCTGCGAAAGTCTAACAGAGGAGAACAAGATGCTGCAAAAAGAGTTGGAAGAGCTTAAATTGATGAAAACAGCATTGCAGGGACCCATTTTTATGCAGCTTCCAGTGCCAACCCTTACGATATGCCCTTCCTGTCAGAGAATTTCCGGTGGCAGCGCCGCCACCACCACCGACAATGCCTCCTCTTCTACCACCACCACCACCTTGCTTGTGGGTCCAAAGCTCCCCCACTTCTATAAAAATAACTACACATTCACACAATCATCTGCAGCTTGCTAG 891 0.4501 MVFDISNPGLQLGLGLGLHDQSQETCMKSHERRRRQRQSQKKKEADPRKNKTHPSLRLGPPHDDDANNNHQVTKTDSDECCDDFHGRASPPSAVSSFLNSSSIIKRERDREEVELEVEKFPSNLRVVDLHEYGNYSKKKLRLTKEQSAVLEDSFKDHSTLTLTQKQELAKKLNLRARQVEVWFQNRRARTKLKQTEMNCEILKKCCESLTEENKMLQKELEELKLMKTALQGPIFMQLPVPTLTICPSCQRISGGSAATTTDNASSSTTTTTLLVGPKLPHFYKNNYTFTQSSAAC 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03331 296 MobiDBLite consensus disorder prediction 40 85 - -
Viun9g03331 296 Pfam Homeodomain 137 191 IPR001356 GO:0003677
Viun9g03331 296 ProSiteProfiles 'Homeobox' domain profile. 133 193 IPR001356 GO:0003677
Viun9g03331 296 Gene3D - 133 199 - -
Viun9g03331 296 SUPERFAMILY Homeodomain-like 129 194 IPR009057 -
Viun9g03331 296 CDD homeodomain 137 194 IPR001356 GO:0003677
Viun9g03331 296 ProSitePatterns 'Homeobox' domain signature. 168 191 IPR017970 GO:0000981|GO:0006355
Viun9g03331 296 SMART halz 193 236 IPR003106 GO:0006355|GO:0043565
Viun9g03331 296 SMART HOX_1 136 197 IPR001356 GO:0003677
Viun9g03331 296 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 12 270 - -
Viun9g03331 296 Pfam Homeobox associated leucine zipper 193 226 IPR003106 GO:0006355|GO:0043565
Viun9g03331 296 MobiDBLite consensus disorder prediction 12 97 - -
Viun9g03331 296 Coils Coil 192 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03331 Viun-Chr9 39965647 39968527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03331 125 296 Homeobox Transcription Factor Family AT4G37790 57.471 7.62e-56 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Viun9g03331 Homeodomain 1.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03331 K09338 - gmx:100790927 312.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03331 9 39965647 39968527 Viun9g03331 9 39965647 39968527 ECH