Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03302 ATGGGAATAGCCAGAAAATGTTCATATTGTGGTAATTTAGGTCACAATTCAAGAACTTGTAAAACTCCTCTCAGTCATACATACCTGAAGCTCTTTGGAGTGCAGGTTGAAATTTCTTCTTCGTCTTCTTCTTCATCTTCTTCTTCGTCTTCCTCTTCCTCTTCATCTTCTACTATTTCTTTTTCTTCACCTTCATATTCTGCCATGAAACCGAGTTTCAGCACCAACTACTTCTTCTCTTCATCTCCTTCCCTGCGTGACGGAAACCAAAATTCAGATGCTTACTTACTCACTGCCAATACCCTCCTATCGACAATCCAAGACACAAAAAAAGGTGTAGCATGGACAGAGGAAGAACACAGGGTGTTTCTGGTAGGGCTTCAGAAGCTGGGGAAGGGAAACTGGAGAGGAATATCGAAAAGTTTTGTGAAAACAAGAACACCTGTGCAAGTGGCAAGTCATGCACAGAAGTATTTTCTCCGACAATCTCACAATATCCCTTCATCTTCATCTTCATCTTCATCTAATTGCACTCTTCAGATGCCACACCCAGATTTAGAACTCAAACTCGCAACTCCCACGCAGATGCATAGTTTTTGA 600 0.415 MGIARKCSYCGNLGHNSRTCKTPLSHTYLKLFGVQVEISSSSSSSSSSSSSSSSSSSTISFSSPSYSAMKPSFSTNYFFSSSPSLRDGNQNSDAYLLTANTLLSTIQDTKKGVAWTEEEHRVFLVGLQKLGKGNWRGISKSFVKTRTPVQVASHAQKYFLRQSHNIPSSSSSSSSNCTLQMPHPDLELKLATPTQMHSF 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03302 199 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 107 163 IPR017930 -
Viun9g03302 199 Pfam Myb-like DNA-binding domain 114 159 IPR001005 -
Viun9g03302 199 Gene3D - 115 164 - -
Viun9g03302 199 SMART sant 111 161 IPR001005 -
Viun9g03302 199 CDD SANT 114 159 IPR001005 -
Viun9g03302 199 FunFam transcription factor MYB1R1 113 164 - -
Viun9g03302 199 NCBIfam myb-like DNA-binding domain, SHAQKYF class 110 162 IPR006447 GO:0003677
Viun9g03302 199 SUPERFAMILY Homeodomain-like 109 163 IPR009057 -
Viun9g03302 199 MobiDBLite consensus disorder prediction 40 59 - -
Viun9g03302 199 ProSiteProfiles Myb-like domain profile. 107 159 IPR001005 -
Viun9g03302 199 PANTHER TRANSCRIPTION FACTOR KUA1 5 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03302 Viun-Chr9 39822089 39824374 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun9g03302 Myb_DNA-binding 3.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03302 - - pvu:PHAVU_009G077300g 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03302 9 39822089 39824374 Viun9g03302 9 39822089 39824374 ECH