Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03289 ATGGTGGTGCTGATGGATTTGGAATGGTGGTTTTCAGTTCCAAGTGTGGTTTCTGCTTCATCAATGTTTACCTTGGCGGGTTTAATAGGAGGGTTGTTGGTATATCTCTATGCACCTTATTGGGGTGTGAGGAAGGTTCCGGCTCCACCTTCTTTGCCTCTTATAGGACACCTTCCCTTGCTCGCCAAATATGGCCCTGATGTCTTCTCAGTCCTTGCCAAACAATATGGTCCGATTTACAGATTCCATATGGGGAGACAGCCATTAATAATTATAGCAAATGCAGAGTTGTGCAAAGAAGCTGGAATTAAGAAATTCAAAGATATTTCAAACAGAAGTATTCCTTCACCAATATCTGCTTCCCCTCTTCACCAAAAGGGTCTCTTCTTCAGCAGGGACTCACAATGGTCTACCATGCGAAACACTATTCTATCGATCTACCAACCATCACACTTATCTGGATTAGTGCCACTGATGCAGTCTTTCATAGAATCCGCCACTGAAAACCTTGATTCTGAAAAAGAAGACATTGTTTTTTCCAACTTGTCCCTGAGACTTGCAACTGATGTGATTGGGCAAGCAGCATTTGGTGTGAACTTTGGTCTTTCTAGACCCCATTCAGTTTGTGATTCCATCAAGAGTGTTGAAACTGACCCTGCAAGTCATGGTAATGACAATGAGGTATCGGATTTCATCAACCAGCACATATACTCCACTACACAACTCAAGATGGACTTGTCTGGTTCTTTCTCCATTATATTGGGTCTGCTTTTGCCGATACTTCAAGAGCCTTTTAGGCAGATTCTGAAGAGAATTCCAGGAACCATGGACTGGAAGATTGAGCGTACGAACCAAAAACTAAGTGGTCGTCTTGATGAGATTGTGGAAAAAAGAATGAAAGATAAGACACGAAGTTCAAAGGATTTCTTGTCACTCATACTTAATGCCAGAGAAACAAAAGCAGTTTCAGAGAATGTATTCACACCAGACTACATCAACGCAGTTACTTACGAGCATCTGCTTGCTGGTTCAGCAACCACGTCTTTTACCTTGTCTTCTGTTATCTATTTGGTTGCTGGACATCCTCAAGTTGAGAAAAAGTTGCTTCACGAGATAGATGCCTTTGGTCCTGTCGATCAGATTCCGACATCTCAAGATCTTCGTGACAACTTCCCTTATCTTGATCAGGTGATCAAAGAGGCAATGAGATTTTACACTGTATCTCCATTAGTTGCAAGAGAAACATCAAATGAAGTGGAGATTGGAGGCTATCTTCTCCCAAAGGGGACTTGGGTGTGGTTAGCACTTGGAGTTGTGGCAAAAGATCCCAAGGACTTTCCGGAGCCAGAAAAGTTCAAACCAGAGAGGTTTGACCCCAACTGTGATGAAATGAAACGAAGGCACCCTTATGCTTTTATACCATTTGGAATTGGTCCTCGGGCTTGCATTGGTAAACAATTTTCCCTACAAGAGATCAAGCTTTCTCTCATTCATTTATATCGGAAATACTTGTTTCGGCATTCACCCAATATGGAAAACCCCTTGGAACTCCAGTATGGGATAGTCCTCAACTTCAAGCATGGGGTCAAGCTCAGAGCCATTAAAAGAACATAA 1614 0.4238 MVVLMDLEWWFSVPSVVSASSMFTLAGLIGGLLVYLYAPYWGVRKVPAPPSLPLIGHLPLLAKYGPDVFSVLAKQYGPIYRFHMGRQPLIIIANAELCKEAGIKKFKDISNRSIPSPISASPLHQKGLFFSRDSQWSTMRNTILSIYQPSHLSGLVPLMQSFIESATENLDSEKEDIVFSNLSLRLATDVIGQAAFGVNFGLSRPHSVCDSIKSVETDPASHGNDNEVSDFINQHIYSTTQLKMDLSGSFSIILGLLLPILQEPFRQILKRIPGTMDWKIERTNQKLSGRLDEIVEKRMKDKTRSSKDFLSLILNARETKAVSENVFTPDYINAVTYEHLLAGSATTSFTLSSVIYLVAGHPQVEKKLLHEIDAFGPVDQIPTSQDLRDNFPYLDQVIKEAMRFYTVSPLVARETSNEVEIGGYLLPKGTWVWLALGVVAKDPKDFPEPEKFKPERFDPNCDEMKRRHPYAFIPFGIGPRACIGKQFSLQEIKLSLIHLYRKYLFRHSPNMENPLELQYGIVLNFKHGVKLRAIKRT 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03289 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 475 484 IPR017972 GO:0005506|GO:0016705
Viun9g03289 537 SUPERFAMILY Cytochrome P450 39 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03289 537 Pfam Cytochrome P450 47 523 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03289 537 PRINTS E-class P450 group I signature 351 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03289 537 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03289 537 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03289 537 PRINTS E-class P450 group I signature 435 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03289 537 PRINTS E-class P450 group I signature 395 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03289 537 PRINTS E-class P450 group I signature 331 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03289 537 PRINTS E-class P450 group I signature 482 505 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03289 537 PRINTS E-class P450 group I signature 472 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03289 537 Gene3D Cytochrome P450 34 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03289 537 PANTHER THROMBOXANE-A SYNTHASE 21 536 - -
Viun9g03289 537 PRINTS P450 superfamily signature 342 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03289 537 PRINTS P450 superfamily signature 482 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03289 537 PRINTS P450 superfamily signature 396 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g03289 537 PRINTS P450 superfamily signature 473 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03289 Viun-Chr9 39721381 39728041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03289 84 536 Cytochrome P450 AT2G26170 73.731 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03289 K20771 - gmx:100797803 957.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03289 9 39721381 39728041 Viun9g03289 9 39721381 39728041 ECH
Viun8g00535 8 3869771 3873486 Viun9g03289 9 39721381 39728041 PCT